HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:324.6 nTPM
HPA Brain:848.3 nTPM
GTEx:324.6 nTPM
FANTOM5:464.1 Scaled Tags Per Million
Pig:904.1 nTPM
Mouse:721.5 nTPM
Allen mouse:16.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB005065
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 848.3
Sample id Sample description nTPM
Hippocampus
nTPM: 587.0
1898 Male, age 80, left hemisphere 919.8
1855 Male, age 76, left hemisphere 632.2
2621 Female, age 67, right hemisphere 593.2
1911 Female, age 85, right hemisphere 515.6
2148 Female, age 91, left hemisphere 470.6
2529 Female, age 94, left hemisphere 390.8
Dentate gyrus
nTPM: 585.3
2010 Male, age 76, both hemispheres 760.7
1927 Female, age 91, both hemispheres 740.9
2246 Female, age 85, both hemispheres 672.6
2531 Female, age 67, both hemispheres 467.4
2528 Male, age 74, both hemispheres 443.4
2530 Female, age 94, left hemisphere 427.0
Entorhinal gyrus
nTPM: 549.0
2764 Male, age 80, right hemisphere 675.4
1938 Female, age 85, left hemisphere 669.4
1787 Male, age 76, left hemisphere 561.3
2613 Female, age 94, left hemisphere 536.5
2117 Female, age 91, right hemisphere 440.2
2686 Male, age 75, right hemisphere 411.2
Hippocampus, CA1
nTPM: 780.3
2749 Male, age 80, left hemisphere 1259.0
1873 Female, age 85, both hemispheres 727.3
2045 Male, age 76, both hemispheres 692.2
2082 Female, age 91, right hemisphere 630.9
2527 Male, age 74, both hemispheres 592.2
Hippocampus, CA2
nTPM: 617.8
1892 Male, age 76, both hemispheres 807.1
1963 Male, age 80, left hemisphere 777.5
1940 Female, age 85, left hemisphere 606.1
2249 Male, age 74, both hemispheres 550.1
2113 Female, age 91, right hemisphere 550.0
2437 Female, age 94, left hemisphere 416.0
Hippocampus, CA3
nTPM: 622.1
2137 Male, age 80, left hemisphere 956.9
1867 Male, age 76, both hemispheres 690.6
2620 Female, age 94, left hemisphere 602.8
2436 Male, age 74, both hemispheres 552.4
1891 Female, age 85, both hemispheres 498.0
2861 Female, age 67, both hemispheres 431.8
Parahippocampal cortex
nTPM: 617.8
1850 Male, age 80, both hemispheres 793.0
2245 Female, age 91, both hemispheres 752.7
1933 Female, age 85, both hemispheres 752.3
2018 Male, age 76, both hemispheres 721.4
2250 Female, age 67, right hemisphere 646.9
2693 Female, age 94, both hemispheres 644.6
1990 Female, age 91, right hemisphere 576.5
2532 Female, age 72, left hemisphere 547.4
2622 Female, age 67, right hemisphere 397.5
2692 Male, age 74, both hemispheres 345.8
Perirhinal gyrus
nTPM: 848.3
1847 Female, age 91, left hemisphere 1034.2
2521 Female, age 94, right hemisphere 901.8
1794 Male, age 80, right hemisphere 871.1
1841 Female, age 85, right hemisphere 808.8
2848 Male, age 76, right hemisphere 625.5
Subiculum
nTPM: 517.2
1977 Female, age 85, both hemispheres 690.2
1901 Male, age 80, both hemispheres 674.4
2042 Male, age 76, both hemispheres 553.0
2729 Female, age 91, right hemisphere 410.3
2438 Female, age 94, left hemisphere 389.0
2619 Male, age 74, both hemispheres 386.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 324.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 324.6
Samples: 197

Max nTPM: 903.2
Min nTPM: 122.6
Std nTPM: 152.1
Median nTPM: 321.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 903.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 738.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 736.2
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 704.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 703.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 664.8
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 644.5
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 642.3
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 634.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 633.3
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 624.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 464.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 464.1
FF:10169-103B7 60 years, female 583.6
FF:10153-102I9 76 years, female 344.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 904.1
Pig sample Sample description nTPM
Subiculum
nTPM: 822.3
Samples: 4

Max nTPM: 1084.1
Min nTPM: 672.4
Sample A Female 1084.1
Sample B Female 774.4
Sample C Male 672.4
Sample D Male 758.3
Dorsal hippocampus
nTPM: 904.1
Samples: 4

Max nTPM: 1178.1
Min nTPM: 704.3
Sample A Female 1178.1
Sample B Female 1009.3
Sample C Male 724.7
Sample D Male 704.3
Entorhinal cortex
nTPM: 794.0
Samples: 4

Max nTPM: 913.5
Min nTPM: 631.5
Sample A Female 913.5
Sample B Female 893.4
Sample C Male 737.4
Sample D Male 631.5
Ventral hippocampus
nTPM: 775.6
Samples: 4

Max nTPM: 953.5
Min nTPM: 571.3
Sample A Female 842.1
Sample B Female 571.3
Sample C Male 735.4
Sample D Male 953.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 721.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 706.6
Samples: 4

Max nTPM: 821.6
Min nTPM: 638.7
Sample A Male 638.7
Sample B Male 708.9
Sample C Female 657.3
Sample D Female 821.6
Hippocampal formation
nTPM: 721.5
Samples: 4

Max nTPM: 767.2
Min nTPM: 627.4
Sample A Male 759.9
Sample B Male 767.2
Sample C Female 731.5
Sample D Female 627.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 16.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 16.0
1133 Antisense, RP_Baylor_103130, Mouse strain C57BL/6J (56 days, male) 16.0
1134 Antisense, RP_Baylor_103130, Mouse strain C57BL/6J (56 days, male) 14.1

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