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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
569.7
nTPM
FANTOM5:
657.2
Scaled Tags Per Million
Pig:
630.8
nTPM
Allen mouse:
12.7
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
569.7
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 290.2
2188
Female, age 91, both hemispheres
324.1
1984
Male, age 76, both hemispheres
291.2
2301
Female, age 85, both hemispheres
273.4
2090
Male, age 80, both hemispheres
272.0
Dorsal cochlear nucleus nTPM: 307.6
2802
Male, age 74, right hemisphere
403.8
2187
Female, age 91, both hemispheres
346.8
2058
Male, age 76, both hemispheres
279.8
2370
Male, age 61, both hemispheres
263.6
2378
Male, age 80, both hemispheres
243.9
Dorsal tegmental nucleus nTPM: 317.6
2326
Male, age 74, both hemispheres
368.9
2083
Male, age 80, both hemispheres
341.3
2358
Male, age 61, both hemispheres
281.3
1936
Male, age 76, left hemisphere
278.7
Dorsolateral tegmental area nTPM: 340.3
2751
Female, age 85, both hemispheres
396.1
2360
Male, age 74, both hemispheres
370.1
2654
Male, age 80, both hemispheres
345.3
2337
Male, age 61, both hemispheres
298.0
2141
Male, age 76, both hemispheres
292.1
Kolliker-Fuse nucleus nTPM: 363.8
2163
Male, age 80, both hemispheres
410.8
2315
Male, age 76, right hemisphere
373.9
2793
Female, age 91, left hemisphere
306.7
Lateral lemniscal nuclei nTPM: 369.0
2169
Male, age 76, both hemispheres
412.3
2453
Male, age 74, right hemisphere
393.9
2746
Female, age 85, left hemisphere
390.5
2036
Male, age 80, both hemispheres
371.6
2320
Female, age 91, left hemisphere
276.5
Lateral parabrachial nucleus nTPM: 348.7
2139
Female, age 85, right hemisphere
423.8
2013
Male, age 80, both hemispheres
355.4
2792
Male, age 76, both hemispheres
308.7
2790
Male, age 61, both hemispheres
306.8
Lateral vestibular nucleus nTPM: 317.4
2184
Male, age 76, both hemispheres
364.2
2311
Male, age 80, both hemispheres
270.7
Locus coeruleus nTPM: 569.7
2123
Female, age 91, both hemispheres
725.8
2014
Male, age 55, unknown
720.3
2720
Male, age 74, both hemispheres
581.8
2788
Male, age 74, unknown
572.9
1980
Male, age 76, both hemispheres
498.6
2317
Female, age 72, unknown
470.5
2162
Male, age 80, both hemispheres
418.3
Medial parabrachial nucleus nTPM: 337.9
2170
Female, age 91, both hemispheres
415.2
2854
Male, age 80, both hemispheres
354.9
2463
Female, age 85, right hemisphere
327.2
2786
Male, age 76, both hemispheres
308.9
2156
Male, age 61, both hemispheres
283.1
Medial periolivary nuclei nTPM: 381.1
2171
Female, age 85, both hemispheres
461.7
2791
Male, age 74, right hemisphere
451.4
2063
Male, age 76, both hemispheres
434.2
2081
Male, age 80, both hemispheres
289.8
2458
Female, age 91, both hemispheres
268.2
Motor facial nucleus nTPM: 368.4
2365
Male, age 74, right hemisphere
459.3
2062
Male, age 76, both hemispheres
435.5
2697
Female, age 85, both hemispheres
353.5
2126
Male, age 61, both hemispheres
332.6
2327
Male, age 80, both hemispheres
326.0
2795
Female, age 91, both hemispheres
303.4
Motor trigeminal nucleus nTPM: 318.2
2560
Male, age 74, both hemispheres
373.2
2079
Male, age 80, both hemispheres
349.9
2309
Male, age 76, both hemispheres
307.4
2335
Male, age 61, both hemispheres
288.4
2321
Female, age 91, both hemispheres
272.2
Nuclei of the trapezoid body nTPM: 404.5
2159
Male, age 61, both hemispheres
530.8
2735
Female, age 85, both hemispheres
475.2
1983
Male, age 76, both hemispheres
424.7
2166
Male, age 80, both hemispheres
324.9
2368
Female, age 91, both hemispheres
267.2
Nucleus raphe magnus nTPM: 430.9
2160
Male, age 61, both hemispheres
647.4
2172
Female, age 85, both hemispheres
483.6
2455
Male, age 74, both hemispheres
481.6
2051
Male, age 76, both hemispheres
349.1
2328
Male, age 80, both hemispheres
328.8
2459
Female, age 91, both hemispheres
295.3
Paramedian reticular nucleus nTPM: 417.0
2050
Female, age 85, both hemispheres
475.7
2313
Male, age 61, both hemispheres
435.0
2057
Male, age 80, both hemispheres
384.0
2052
Male, age 76, both hemispheres
373.4
Pedunculopontine tegmental nucleus nTPM: 357.4
2334
Male, age 80, both hemispheres
399.3
2338
Male, age 61, both hemispheres
337.6
1921
Female, age 85, both hemispheres
335.3
Pontine nuclei nTPM: 444.5
2727
Male, age 61, right hemisphere
617.8
1863
Male, age 55, unknown
537.0
2109
Female, age 72, unknown
489.5
2787
Female, age 85, both hemispheres
487.2
2454
Male, age 74, left hemisphere
450.3
1968
Male, age 76, left hemisphere
375.8
2319
Female, age 91, both hemispheres
307.8
2115
Male, age 80, left hemisphere
290.5
Pontine raphe nucleus nTPM: 412.3
2122
Female, age 85, midline
454.0
2853
Male, age 76, midline
370.6
Posteroventral cochlear nucleus nTPM: 307.3
2752
Female, age 85, both hemispheres
392.7
2070
Male, age 76, both hemispheres
364.3
2341
Male, age 80, both hemispheres
271.6
2371
Male, age 61, both hemispheres
258.2
2135
Female, age 91, both hemispheres
249.9
Principal sensory trigeminal nucleus nTPM: 392.6
2158
Male, age 61, both hemispheres
548.0
2008
Male, age 80, left hemisphere
410.5
2324
Male, age 76, both hemispheres
310.8
2367
Female, age 91, left hemisphere
300.9
Reticular pontine nucleus, caudal nTPM: 347.0
2092
Male, age 76, both hemispheres
387.4
2559
Male, age 74, both hemispheres
371.2
2332
Male, age 80, right hemisphere
328.8
2457
Female, age 91, both hemispheres
300.7
Reticular pontine nucleus, oral nTPM: 375.1
2361
Male, age 74, both hemispheres
453.2
2012
Female, age 85, both hemispheres
430.0
1939
Male, age 80, both hemispheres
382.4
2167
Male, age 76, both hemispheres
342.7
2366
Female, age 91, both hemispheres
267.3
Reticulotegmental nucleus nTPM: 339.8
2452
Male, age 74, both hemispheres
371.2
2325
Male, age 76, both hemispheres
368.5
2322
Female, age 91, both hemispheres
317.8
2333
Male, age 80, both hemispheres
301.8
Spinal trigeminal nucleus, oral nTPM: 349.7
2737
Female, age 85, both hemispheres
371.5
2164
Male, age 80, both hemispheres
362.8
1978
Male, age 76, both hemispheres
315.0
Subcoeruleus area nTPM: 367.0
2323
Female, age 91, left hemisphere
448.8
1958
Male, age 80, both hemispheres
392.1
2369
Female, age 85, left hemisphere
340.1
2451
Male, age 74, both hemispheres
336.3
2089
Male, age 76, left hemisphere
317.8
Superior olive nTPM: 388.2
1875
Female, age 85, both hemispheres
500.9
2364
Male, age 74, right hemisphere
467.5
2020
Male, age 76, both hemispheres
385.0
2329
Male, age 80, right hemisphere
299.5
2561
Female, age 91, both hemispheres
287.9
Ventral periolivary nuclei nTPM: 385.0
2130
Female, age 85, both hemispheres
439.5
2165
Male, age 80, both hemispheres
399.1
2023
Male, age 76, both hemispheres
396.8
2794
Female, age 91, left hemisphere
304.5
Ventrolateral tegmental area, A5 NE cell group nTPM: 359.5
2449
Male, age 74, both hemispheres
418.6
1959
Male, age 76, both hemispheres
391.7
2840
Female, age 85, both hemispheres
385.4
2359
Male, age 61, both hemispheres
370.7
2161
Male, age 80, both hemispheres
329.0
2456
Female, age 91, both hemispheres
261.7
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
630.8
Pig sample
Sample description
nTPM
Pons nTPM: 630.8
Samples: 4
Max nTPM: 1034.7
Min nTPM: 412.6
Sample A
Female
1034.7
Sample B
Female
412.6
Sample C
Male
569.6
Sample D
Male
506.1
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
