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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
68.6
nTPM
Monaco:
29.2
nTPM
Schmiedel:
50.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
68.6
HPA sample
nTPM
gdT-cell nTPM: 38.3
Samples: 6
Max nTPM: 54.8
Min nTPM: 23.3
P10809_1007
30.8
P10809_1022
43.6
P10809_1041
54.8
P10809_1060
39.0
P10809_1077
23.3
P10809_1098
38.3
MAIT T-cell nTPM: 47.4
Samples: 6
Max nTPM: 62.5
Min nTPM: 29.2
P10809_1006
42.6
P10809_1024
62.5
P10809_1043
55.2
P10809_1062
29.2
P10809_1083
45.2
P10809_1097
49.9
Memory CD4 T-cell nTPM: 44.7
Samples: 6
Max nTPM: 64.4
Min nTPM: 37.2
P10809_1014
39.6
P10809_1026
38.8
P10809_1045
64.4
P10809_1064
40.4
P10809_1086
37.2
P10809_1113
47.5
Memory CD8 T-cell nTPM: 40.3
Samples: 5
Max nTPM: 43.0
Min nTPM: 37.3
P10809_1012
41.8
P10809_1027
37.3
P10809_1046
39.1
P10809_1065
43.0
P10809_1111
40.4
Naive CD4 T-cell nTPM: 51.9
Samples: 6
Max nTPM: 64.3
Min nTPM: 38.1
P10809_1015
38.1
P10809_1030
62.9
P10809_1049
64.3
P10809_1068
55.6
P10809_1085
44.0
P10809_1112
46.7
Naive CD8 T-cell nTPM: 50.0
Samples: 6
Max nTPM: 78.3
Min nTPM: 34.2
P10809_1016
46.3
P10809_1031
78.3
P10809_1050
53.1
P10809_1069
38.2
P10809_1087
34.2
P10809_1110
49.9
T-reg nTPM: 68.6
Samples: 6
Max nTPM: 100.1
Min nTPM: 55.5
P10809_1018
56.6
P10809_1037
55.5
P10809_1056
67.6
P10809_1075
74.9
P10809_1094
100.1
P10809_1106
56.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
29.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 17.0
Samples: 4
Max nTPM: 26.9
Min nTPM: 10.8
RHH5202_R3573
10.8
RHH5230_R3602
12.1
RHH5259_R3631
18.0
RHH5288_R3660
26.9
Effector memory CD8 T-cell nTPM: 14.5
Samples: 4
Max nTPM: 18.4
Min nTPM: 11.5
RHH5203_R3574
18.4
RHH5231_R3603
16.0
RHH5260_R3632
11.5
RHH5289_R3661
12.2
MAIT T-cell nTPM: 22.9
Samples: 4
Max nTPM: 37.8
Min nTPM: 15.8
RHH5233_R3605
17.2
RHH5205_R3576
20.9
RHH5262_R3634
15.8
RHH5297_R3663
37.8
Memory CD4 T-cell TFH nTPM: 22.9
Samples: 4
Max nTPM: 34.5
Min nTPM: 12.2
RHH5300_R3666
24.7
RHH5236_R3608
34.5
RHH5265_R3637
20.0
RHH5208_R3579
12.2
Memory CD4 T-cell Th1 nTPM: 29.3
Samples: 4
Max nTPM: 48.7
Min nTPM: 16.0
RHH5210_R3581
26.7
RHH5302_R3668
48.7
RHH5238_R3610
25.6
RHH5267_R3639
16.0
Memory CD4 T-cell Th1/Th17 nTPM: 22.4
Samples: 4
Max nTPM: 31.6
Min nTPM: 10.3
RHH5303_R3669
31.6
RHH5211_R3582
26.2
RHH5239_R3611
10.3
RHH5268_R3640
21.4
Memory CD4 T-cell Th17 nTPM: 18.6
Samples: 4
Max nTPM: 29.0
Min nTPM: 8.6
RHH5304_R3670
23.8
RHH5212_R3583
29.0
RHH5240_R3612
8.6
RHH5269_R3641
13.0
Memory CD4 T-cell Th2 nTPM: 21.5
Samples: 4
Max nTPM: 29.6
Min nTPM: 13.1
RHH5305_R3671
29.6
RHH5213_R3584
18.9
RHH5241_R3613
24.4
RHH5270_R3642
13.1
Naive CD4 T-cell nTPM: 21.0
Samples: 4
Max nTPM: 28.0
Min nTPM: 14.1
RHH5306_R3672
21.8
RHH5214_R3585
28.0
RHH5242_R3614
14.1
RHH5271_R3643
19.9
Naive CD8 T-cell nTPM: 15.3
Samples: 4
Max nTPM: 19.8
Min nTPM: 8.4
RHH5201_R3572
17.9
RHH5229_R3601
8.4
RHH5258_R3630
19.8
RHH5287_R3659
15.0
Non-Vd2 gdTCR nTPM: 17.2
Samples: 4
Max nTPM: 24.0
Min nTPM: 11.1
RHH5235_R3607
11.1
RHH5264_R3636
19.4
RHH5207_R3578
14.3
RHH5299_R3665
24.0
T-reg nTPM: 24.9
Samples: 4
Max nTPM: 40.5
Min nTPM: 18.0
RHH5301_R3667
40.5
RHH5237_R3609
22.1
RHH5266_R3638
18.0
RHH5209_R3580
19.0
Terminal effector memory CD4 T-cell nTPM: 16.9
Samples: 2
Max nTPM: 25.9
Min nTPM: 7.9
RHH5243_R3615
7.9
RHH5272_R3644
25.9
Terminal effector memory CD8 T-cell nTPM: 23.4
Samples: 4
Max nTPM: 41.5
Min nTPM: 9.6
RHH5232_R3604
9.6
RHH5204_R3575
41.5
RHH5261_R3633
21.2
RHH5296_R3662
21.1
Vd2 gdTCR nTPM: 21.8
Samples: 4
Max nTPM: 27.8
Min nTPM: 15.9
RHH5234_R3606
15.9
RHH5206_R3577
27.8
RHH5263_R3635
17.2
RHH5298_R3664
26.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
