HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:79.7 nTPM
HPA Brain:99.7 nTPM
GTEx:79.7 nTPM
FANTOM5:176.4 Scaled Tags Per Million
Pig:188.2 nTPM
Mouse:141.3 nTPM
Allen mouse:6.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019697Antibody CAB013718
Glial cells HighHigh
Neuronal cells HighHigh




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 99.7
Sample id Sample description nTPM
Hippocampus
nTPM: 80.1
2621 Female, age 67, right hemisphere 88.1
1898 Male, age 80, left hemisphere 85.1
2529 Female, age 94, left hemisphere 80.4
1855 Male, age 76, left hemisphere 80.3
1911 Female, age 85, right hemisphere 78.4
2148 Female, age 91, left hemisphere 68.4
Dentate gyrus
nTPM: 79.1
2246 Female, age 85, both hemispheres 89.7
2531 Female, age 67, both hemispheres 84.3
2530 Female, age 94, left hemisphere 77.6
2010 Male, age 76, both hemispheres 77.3
1927 Female, age 91, both hemispheres 76.5
2528 Male, age 74, both hemispheres 69.2
Entorhinal gyrus
nTPM: 82.9
1938 Female, age 85, left hemisphere 98.1
1787 Male, age 76, left hemisphere 87.0
2613 Female, age 94, left hemisphere 80.9
2117 Female, age 91, right hemisphere 79.6
2686 Male, age 75, right hemisphere 78.3
2764 Male, age 80, right hemisphere 73.5
Hippocampus, CA1
nTPM: 79.2
2527 Male, age 74, both hemispheres 86.7
2749 Male, age 80, left hemisphere 84.3
2045 Male, age 76, both hemispheres 80.9
1873 Female, age 85, both hemispheres 80.2
2082 Female, age 91, right hemisphere 63.9
Hippocampus, CA2
nTPM: 75.1
1892 Male, age 76, both hemispheres 89.8
1940 Female, age 85, left hemisphere 78.3
2249 Male, age 74, both hemispheres 77.8
2437 Female, age 94, left hemisphere 70.0
2113 Female, age 91, right hemisphere 68.4
1963 Male, age 80, left hemisphere 66.3
Hippocampus, CA3
nTPM: 78.8
2137 Male, age 80, left hemisphere 86.0
2620 Female, age 94, left hemisphere 84.7
1867 Male, age 76, both hemispheres 80.0
1891 Female, age 85, both hemispheres 78.9
2436 Male, age 74, both hemispheres 72.4
2861 Female, age 67, both hemispheres 70.9
Parahippocampal cortex
nTPM: 87.5
2245 Female, age 91, both hemispheres 104.2
2532 Female, age 72, left hemisphere 97.9
1850 Male, age 80, both hemispheres 96.0
1933 Female, age 85, both hemispheres 89.0
2622 Female, age 67, right hemisphere 87.1
2693 Female, age 94, both hemispheres 86.0
1990 Female, age 91, right hemisphere 84.4
2250 Female, age 67, right hemisphere 84.2
2692 Male, age 74, both hemispheres 73.1
2018 Male, age 76, both hemispheres 72.8
Perirhinal gyrus
nTPM: 99.7
1841 Female, age 85, right hemisphere 104.9
2848 Male, age 76, right hemisphere 102.9
2521 Female, age 94, right hemisphere 100.3
1794 Male, age 80, right hemisphere 98.8
1847 Female, age 91, left hemisphere 91.3
Subiculum
nTPM: 84.0
2438 Female, age 94, left hemisphere 112.9
1977 Female, age 85, both hemispheres 89.3
1901 Male, age 80, both hemispheres 85.5
2619 Male, age 74, both hemispheres 75.6
2042 Male, age 76, both hemispheres 74.4
2729 Female, age 91, right hemisphere 66.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 79.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 79.7
Samples: 197

Max nTPM: 147.0
Min nTPM: 38.5
Std nTPM: 15.7
Median nTPM: 76.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 147.0
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 136.3
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 128.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 119.8
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 117.9
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 117.7
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 114.5
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 110.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 108.8
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 108.5
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 107.6
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 176.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 176.4
FF:10169-103B7 60 years, female 200.4
FF:10153-102I9 76 years, female 152.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 188.2
Pig sample Sample description nTPM
Subiculum
nTPM: 184.8
Samples: 4

Max nTPM: 228.8
Min nTPM: 157.8
Sample A Female 228.8
Sample B Female 171.7
Sample C Male 157.8
Sample D Male 181.0
Dorsal hippocampus
nTPM: 188.2
Samples: 4

Max nTPM: 210.6
Min nTPM: 176.6
Sample A Female 210.6
Sample B Female 181.1
Sample C Male 184.5
Sample D Male 176.6
Entorhinal cortex
nTPM: 170.6
Samples: 4

Max nTPM: 187.4
Min nTPM: 156.9
Sample A Female 187.4
Sample B Female 156.9
Sample C Male 180.0
Sample D Male 158.2
Ventral hippocampus
nTPM: 165.3
Samples: 4

Max nTPM: 189.6
Min nTPM: 154.7
Sample A Female 189.6
Sample B Female 159.7
Sample C Male 154.7
Sample D Male 157.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 141.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 132.2
Samples: 4

Max nTPM: 147.0
Min nTPM: 117.5
Sample A Male 130.6
Sample B Male 147.0
Sample C Female 133.6
Sample D Female 117.5
Hippocampal formation
nTPM: 141.3
Samples: 4

Max nTPM: 151.3
Min nTPM: 131.1
Sample A Male 151.3
Sample B Male 150.3
Sample C Female 131.1
Sample D Female 132.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.6
70565135 Antisense, RP_050623_04_C09, Mouse strain C57BL/6J (56 days, male) 6.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org