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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
65.9
nTPM
Monaco:
132.9
nTPM
Schmiedel:
135.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
65.9
HPA sample
nTPM
gdT-cell nTPM: 38.1
Samples: 6
Max nTPM: 48.8
Min nTPM: 26.0
P10809_1007
26.0
P10809_1022
43.8
P10809_1041
40.2
P10809_1060
36.5
P10809_1077
33.4
P10809_1098
48.8
MAIT T-cell nTPM: 65.9
Samples: 6
Max nTPM: 86.2
Min nTPM: 55.5
P10809_1006
60.5
P10809_1024
86.2
P10809_1043
70.5
P10809_1062
67.1
P10809_1083
55.5
P10809_1097
55.5
Memory CD4 T-cell nTPM: 38.2
Samples: 6
Max nTPM: 46.6
Min nTPM: 29.6
P10809_1014
31.5
P10809_1026
36.4
P10809_1045
45.0
P10809_1064
29.6
P10809_1086
39.8
P10809_1113
46.6
Memory CD8 T-cell nTPM: 40.0
Samples: 5
Max nTPM: 47.5
Min nTPM: 32.2
P10809_1012
32.8
P10809_1027
32.2
P10809_1046
46.0
P10809_1065
47.5
P10809_1111
41.4
Naive CD4 T-cell nTPM: 36.4
Samples: 6
Max nTPM: 43.3
Min nTPM: 27.0
P10809_1015
27.0
P10809_1030
34.7
P10809_1049
43.3
P10809_1068
34.2
P10809_1085
38.8
P10809_1112
40.3
Naive CD8 T-cell nTPM: 29.9
Samples: 6
Max nTPM: 37.4
Min nTPM: 20.4
P10809_1016
20.4
P10809_1031
27.6
P10809_1050
26.7
P10809_1069
33.6
P10809_1087
37.4
P10809_1110
33.7
T-reg nTPM: 53.0
Samples: 6
Max nTPM: 74.2
Min nTPM: 42.0
P10809_1018
42.6
P10809_1037
42.0
P10809_1056
74.2
P10809_1075
44.2
P10809_1094
59.2
P10809_1106
55.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
132.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 95.4
Samples: 4
Max nTPM: 118.0
Min nTPM: 80.7
RHH5202_R3573
80.7
RHH5230_R3602
118.0
RHH5259_R3631
99.8
RHH5288_R3660
83.2
Effector memory CD8 T-cell nTPM: 89.4
Samples: 4
Max nTPM: 99.3
Min nTPM: 66.8
RHH5203_R3574
94.9
RHH5231_R3603
66.8
RHH5260_R3632
99.3
RHH5289_R3661
96.4
MAIT T-cell nTPM: 132.9
Samples: 4
Max nTPM: 178.9
Min nTPM: 104.6
RHH5233_R3605
121.9
RHH5205_R3576
178.9
RHH5262_R3634
104.6
RHH5297_R3663
126.1
Memory CD4 T-cell TFH nTPM: 86.7
Samples: 4
Max nTPM: 112.2
Min nTPM: 74.2
RHH5300_R3666
77.4
RHH5236_R3608
112.2
RHH5265_R3637
74.2
RHH5208_R3579
82.8
Memory CD4 T-cell Th1 nTPM: 88.3
Samples: 4
Max nTPM: 95.3
Min nTPM: 81.7
RHH5210_R3581
95.3
RHH5302_R3668
89.7
RHH5238_R3610
86.5
RHH5267_R3639
81.7
Memory CD4 T-cell Th1/Th17 nTPM: 118.7
Samples: 4
Max nTPM: 143.6
Min nTPM: 99.1
RHH5303_R3669
107.8
RHH5211_R3582
143.6
RHH5239_R3611
124.4
RHH5268_R3640
99.1
Memory CD4 T-cell Th17 nTPM: 123.5
Samples: 4
Max nTPM: 144.6
Min nTPM: 106.3
RHH5304_R3670
130.0
RHH5212_R3583
112.9
RHH5240_R3612
144.6
RHH5269_R3641
106.3
Memory CD4 T-cell Th2 nTPM: 87.0
Samples: 4
Max nTPM: 109.8
Min nTPM: 67.4
RHH5305_R3671
82.9
RHH5213_R3584
109.8
RHH5241_R3613
67.4
RHH5270_R3642
87.8
Naive CD4 T-cell nTPM: 69.2
Samples: 4
Max nTPM: 92.1
Min nTPM: 52.2
RHH5306_R3672
62.6
RHH5214_R3585
70.0
RHH5242_R3614
52.2
RHH5271_R3643
92.1
Naive CD8 T-cell nTPM: 84.3
Samples: 4
Max nTPM: 96.4
Min nTPM: 76.9
RHH5201_R3572
76.9
RHH5229_R3601
96.4
RHH5258_R3630
83.6
RHH5287_R3659
80.2
Non-Vd2 gdTCR nTPM: 91.9
Samples: 4
Max nTPM: 119.5
Min nTPM: 72.4
RHH5235_R3607
119.5
RHH5264_R3636
84.1
RHH5207_R3578
91.4
RHH5299_R3665
72.4
T-reg nTPM: 95.3
Samples: 4
Max nTPM: 108.4
Min nTPM: 78.2
RHH5301_R3667
78.2
RHH5237_R3609
108.4
RHH5266_R3638
92.2
RHH5209_R3580
102.3
Terminal effector memory CD4 T-cell nTPM: 100.1
Samples: 2
Max nTPM: 114.4
Min nTPM: 85.7
RHH5243_R3615
114.4
RHH5272_R3644
85.7
Terminal effector memory CD8 T-cell nTPM: 79.8
Samples: 4
Max nTPM: 86.2
Min nTPM: 74.2
RHH5232_R3604
86.2
RHH5204_R3575
74.2
RHH5261_R3633
77.1
RHH5296_R3662
81.8
Vd2 gdTCR nTPM: 98.8
Samples: 4
Max nTPM: 124.6
Min nTPM: 73.5
RHH5234_R3606
107.4
RHH5206_R3577
89.7
RHH5263_R3635
124.6
RHH5298_R3664
73.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
