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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
58.0
nTPM
Monaco:
211.3
nTPM
Schmiedel:
153.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
58.0
HPA sample
nTPM
gdT-cell nTPM: 31.4
Samples: 6
Max nTPM: 39.5
Min nTPM: 24.6
P10809_1007
24.6
P10809_1022
34.6
P10809_1041
39.5
P10809_1060
29.2
P10809_1077
25.1
P10809_1098
35.6
MAIT T-cell nTPM: 58.1
Samples: 6
Max nTPM: 81.3
Min nTPM: 50.7
P10809_1006
52.8
P10809_1024
81.3
P10809_1043
51.5
P10809_1062
50.7
P10809_1083
54.6
P10809_1097
57.4
Memory CD4 T-cell nTPM: 22.9
Samples: 6
Max nTPM: 30.2
Min nTPM: 11.8
P10809_1014
25.2
P10809_1026
11.8
P10809_1045
30.2
P10809_1064
26.0
P10809_1086
18.7
P10809_1113
25.4
Memory CD8 T-cell nTPM: 22.2
Samples: 5
Max nTPM: 24.4
Min nTPM: 20.5
P10809_1012
24.4
P10809_1027
20.9
P10809_1046
24.2
P10809_1065
20.9
P10809_1111
20.5
Naive CD4 T-cell nTPM: 34.0
Samples: 6
Max nTPM: 40.0
Min nTPM: 22.8
P10809_1015
37.0
P10809_1030
40.0
P10809_1049
32.8
P10809_1068
22.8
P10809_1085
32.5
P10809_1112
38.7
Naive CD8 T-cell nTPM: 25.2
Samples: 6
Max nTPM: 31.6
Min nTPM: 17.4
P10809_1016
29.1
P10809_1031
28.2
P10809_1050
22.9
P10809_1069
17.4
P10809_1087
21.7
P10809_1110
31.6
T-reg nTPM: 3.0
Samples: 6
Max nTPM: 6.9
Min nTPM: 0.1
P10809_1018
6.3
P10809_1037
6.9
P10809_1056
0.1
P10809_1075
0.3
P10809_1094
1.6
P10809_1106
2.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
211.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 102.9
Samples: 4
Max nTPM: 133.4
Min nTPM: 81.7
RHH5202_R3573
103.6
RHH5230_R3602
133.4
RHH5259_R3631
93.0
RHH5288_R3660
81.7
Effector memory CD8 T-cell nTPM: 128.8
Samples: 4
Max nTPM: 159.8
Min nTPM: 94.2
RHH5203_R3574
159.8
RHH5231_R3603
133.0
RHH5260_R3632
128.3
RHH5289_R3661
94.2
MAIT T-cell nTPM: 211.3
Samples: 4
Max nTPM: 240.6
Min nTPM: 169.4
RHH5233_R3605
240.6
RHH5205_R3576
208.4
RHH5262_R3634
226.6
RHH5297_R3663
169.4
Memory CD4 T-cell TFH nTPM: 105.2
Samples: 4
Max nTPM: 141.0
Min nTPM: 66.9
RHH5300_R3666
66.9
RHH5236_R3608
141.0
RHH5265_R3637
89.0
RHH5208_R3579
124.0
Memory CD4 T-cell Th1 nTPM: 94.5
Samples: 4
Max nTPM: 107.4
Min nTPM: 72.6
RHH5210_R3581
107.4
RHH5302_R3668
72.6
RHH5238_R3610
98.7
RHH5267_R3639
99.4
Memory CD4 T-cell Th1/Th17 nTPM: 152.9
Samples: 4
Max nTPM: 183.3
Min nTPM: 138.7
RHH5303_R3669
150.3
RHH5211_R3582
183.3
RHH5239_R3611
139.3
RHH5268_R3640
138.7
Memory CD4 T-cell Th17 nTPM: 141.2
Samples: 4
Max nTPM: 166.1
Min nTPM: 114.6
RHH5304_R3670
149.3
RHH5212_R3583
114.6
RHH5240_R3612
166.1
RHH5269_R3641
134.7
Memory CD4 T-cell Th2 nTPM: 89.9
Samples: 4
Max nTPM: 95.1
Min nTPM: 78.6
RHH5305_R3671
78.6
RHH5213_R3584
95.1
RHH5241_R3613
95.1
RHH5270_R3642
90.6
Naive CD4 T-cell nTPM: 134.4
Samples: 4
Max nTPM: 146.2
Min nTPM: 113.2
RHH5306_R3672
113.2
RHH5214_R3585
145.8
RHH5242_R3614
146.2
RHH5271_R3643
132.3
Naive CD8 T-cell nTPM: 136.5
Samples: 4
Max nTPM: 190.3
Min nTPM: 105.5
RHH5201_R3572
190.3
RHH5229_R3601
105.5
RHH5258_R3630
114.3
RHH5287_R3659
136.0
Non-Vd2 gdTCR nTPM: 126.2
Samples: 4
Max nTPM: 163.7
Min nTPM: 103.2
RHH5235_R3607
117.7
RHH5264_R3636
120.3
RHH5207_R3578
163.7
RHH5299_R3665
103.2
T-reg nTPM: 74.9
Samples: 4
Max nTPM: 82.8
Min nTPM: 59.3
RHH5301_R3667
59.3
RHH5237_R3609
81.5
RHH5266_R3638
82.8
RHH5209_R3580
75.8
Terminal effector memory CD4 T-cell nTPM: 140.7
Samples: 2
Max nTPM: 143.7
Min nTPM: 137.6
RHH5243_R3615
137.6
RHH5272_R3644
143.7
Terminal effector memory CD8 T-cell nTPM: 123.3
Samples: 4
Max nTPM: 161.2
Min nTPM: 79.7
RHH5232_R3604
161.2
RHH5204_R3575
131.6
RHH5261_R3633
120.7
RHH5296_R3662
79.7
Vd2 gdTCR nTPM: 149.6
Samples: 4
Max nTPM: 184.0
Min nTPM: 104.5
RHH5234_R3606
148.8
RHH5206_R3577
160.9
RHH5263_R3635
184.0
RHH5298_R3664
104.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
