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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
331.2
nTPM
GTEx:
331.2
nTPM
FANTOM5:
309.7
Scaled Tags Per Million
Pig:
121.7
nTPM
Mouse:
540.6
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
331.2
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 331.2
Samples: 105
Max nTPM: 465.5
Min nTPM: 232.4
Std nTPM: 51.3
Median nTPM: 0.0
322_1
76 years, male
465.5
316_1
62 years, male
444.5
501_1
88 years, male
434.4
495_1
57 years, female
433.6
413_1
59 years, female
431.4
43_1
64 years, female
415.3
379_1
60 years, male
415.2
137_1
83 years, male
414.5
266_1
85 years, male
411.4
490_1
67 years, female
410.4
17_1
71 years, male
406.6
139_1
64 years, female
404.8
375_1
74 years, female
401.6
35_1
74 years, female
400.3
491_1
89 years, female
399.8
386_1
76 years, male
392.9
237_1
82 years, male
392.0
308_1
70 years, female
391.6
142_1
61 years, female
384.2
518_1
75 years, female
379.9
415_1
77 years, female
379.7
414_1
84 years, female
378.0
145_1
84 years, male
373.4
81_1
67 years, male
370.3
6_1
73 years, female
366.1
217_1
76 years, male
363.7
348_1
84 years, male
363.2
324_1
76 years, male
357.9
117_1
61 years, male
356.9
313_1
79 years, female
355.6
4_1
88 years, female
355.5
162_1
79 years, female
354.6
149_1
88 years, male
353.5
18_1
88 years, male
351.7
466_1
57 years, female
350.6
2_1
77 years, female
350.4
126_1
63 years, male
349.7
405_1
91 years, male
348.5
32_1
67 years, male
346.5
377_1
82 years, female
345.0
447_1
81 years, male
344.2
321_1
62 years, female
342.5
229_1
69 years, female
341.8
319_1
81 years, male
340.3
396_1
62 years, male
340.2
120_1
70 years, female
335.8
311_1
78 years, male
335.7
218_1
71 years, female
333.8
119_1
70 years, female
332.9
115_1
83 years, male
332.7
404_1
82 years, female
330.5
246_1
77 years, male
328.3
376_1
75 years, female
327.8
307_1
66 years, female
324.4
265_1
87 years, male
323.1
320_1
89 years, female
323.1
468_1
89 years, male
322.5
347_1
72 years, male
321.1
173_1
67 years, male
321.0
315_1
62 years, female
319.6
389_1
86 years, female
317.7
42_1
85 years, male
311.7
9_1
66 years, female
311.3
153_1
70 years, female
307.9
286_1
68 years, female
307.5
293_1
68 years, female
307.5
526_1
61 years, male
304.6
264_1
73 years, female
304.2
499_1
55 years, female
303.0
177_1
74 years, male
302.0
480_1
63 years, male
298.3
109_1
81 years, female
297.3
406_1
79 years, male
297.1
384_1
83 years, male
296.5
243_1
75 years, male
294.2
452_1
88 years, female
293.8
288_1
66 years, female
292.8
189_1
76 years, male
292.4
89_1
63 years, male
291.5
506_1
65 years, male
288.5
318_1
68 years, male
286.4
335_1
73 years, female
286.4
292_1
71 years, male
285.9
354_1
81 years, female
285.1
314_1
67 years, male
284.3
425_1
59 years, female
283.5
172_1
72 years, female
282.3
349_1
83 years, male
281.4
350_1
84 years, female
280.6
503_1
68 years, male
278.3
352_1
62 years, male
275.9
163_1
78 years, male
274.1
353_1
82 years, female
273.0
251_1
78 years, male
272.3
351_1
91 years, male
271.9
254_1
77 years, female
270.4
99_1
64 years, male
269.0
295_1
61 years, female
268.6
394_1
75 years, female
259.0
517_1
88 years, male
258.8
317_1
60 years, male
255.8
41_1
94 years, female
246.1
291_1
76 years, male
242.7
356_1
87 years, female
235.0
355_1
70 years, female
232.4
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.