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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
35.9
nTPM
Monaco:
162.6
nTPM
Schmiedel:
111.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
35.9
HPA sample
nTPM
gdT-cell nTPM: 17.1
Samples: 6
Max nTPM: 21.8
Min nTPM: 14.8
P10809_1007
15.8
P10809_1022
21.8
P10809_1041
14.8
P10809_1060
16.0
P10809_1077
16.1
P10809_1098
18.3
MAIT T-cell nTPM: 35.8
Samples: 6
Max nTPM: 42.8
Min nTPM: 24.0
P10809_1006
33.7
P10809_1024
41.9
P10809_1043
24.0
P10809_1062
30.0
P10809_1083
42.6
P10809_1097
42.8
Memory CD4 T-cell nTPM: 24.0
Samples: 6
Max nTPM: 33.1
Min nTPM: 17.3
P10809_1014
25.0
P10809_1026
24.6
P10809_1045
17.3
P10809_1064
20.5
P10809_1086
33.1
P10809_1113
23.7
Memory CD8 T-cell nTPM: 22.8
Samples: 5
Max nTPM: 26.7
Min nTPM: 18.1
P10809_1012
23.2
P10809_1027
26.7
P10809_1046
18.1
P10809_1065
20.2
P10809_1111
25.8
Naive CD4 T-cell nTPM: 20.5
Samples: 6
Max nTPM: 27.1
Min nTPM: 15.1
P10809_1015
27.1
P10809_1030
15.1
P10809_1049
16.1
P10809_1068
20.8
P10809_1085
22.7
P10809_1112
21.3
Naive CD8 T-cell nTPM: 20.2
Samples: 6
Max nTPM: 25.6
Min nTPM: 14.4
P10809_1016
17.9
P10809_1031
22.5
P10809_1050
14.4
P10809_1069
22.7
P10809_1087
25.6
P10809_1110
17.9
T-reg nTPM: 14.7
Samples: 6
Max nTPM: 20.6
Min nTPM: 12.3
P10809_1018
12.3
P10809_1037
13.1
P10809_1056
13.9
P10809_1075
20.6
P10809_1094
15.8
P10809_1106
12.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
162.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 92.6
Samples: 4
Max nTPM: 122.4
Min nTPM: 70.4
RHH5202_R3573
82.4
RHH5230_R3602
122.4
RHH5259_R3631
70.4
RHH5288_R3660
95.3
Effector memory CD8 T-cell nTPM: 84.4
Samples: 4
Max nTPM: 105.0
Min nTPM: 69.9
RHH5203_R3574
86.6
RHH5231_R3603
69.9
RHH5260_R3632
76.1
RHH5289_R3661
105.0
MAIT T-cell nTPM: 162.6
Samples: 4
Max nTPM: 171.1
Min nTPM: 158.1
RHH5233_R3605
158.1
RHH5205_R3576
171.1
RHH5262_R3634
161.6
RHH5297_R3663
159.5
Memory CD4 T-cell TFH nTPM: 91.4
Samples: 4
Max nTPM: 131.9
Min nTPM: 72.4
RHH5300_R3666
73.3
RHH5236_R3608
87.8
RHH5265_R3637
72.4
RHH5208_R3579
131.9
Memory CD4 T-cell Th1 nTPM: 79.2
Samples: 4
Max nTPM: 98.0
Min nTPM: 63.8
RHH5210_R3581
69.6
RHH5302_R3668
98.0
RHH5238_R3610
85.2
RHH5267_R3639
63.8
Memory CD4 T-cell Th1/Th17 nTPM: 141.9
Samples: 4
Max nTPM: 168.6
Min nTPM: 124.0
RHH5303_R3669
168.6
RHH5211_R3582
124.0
RHH5239_R3611
148.3
RHH5268_R3640
126.7
Memory CD4 T-cell Th17 nTPM: 135.8
Samples: 4
Max nTPM: 162.0
Min nTPM: 109.7
RHH5304_R3670
162.0
RHH5212_R3583
111.1
RHH5240_R3612
160.3
RHH5269_R3641
109.7
Memory CD4 T-cell Th2 nTPM: 91.6
Samples: 4
Max nTPM: 101.8
Min nTPM: 77.1
RHH5305_R3671
92.8
RHH5213_R3584
94.6
RHH5241_R3613
101.8
RHH5270_R3642
77.1
Naive CD4 T-cell nTPM: 89.4
Samples: 4
Max nTPM: 113.5
Min nTPM: 72.7
RHH5306_R3672
83.2
RHH5214_R3585
88.2
RHH5242_R3614
72.7
RHH5271_R3643
113.5
Naive CD8 T-cell nTPM: 72.6
Samples: 4
Max nTPM: 93.8
Min nTPM: 61.5
RHH5201_R3572
93.8
RHH5229_R3601
67.4
RHH5258_R3630
67.8
RHH5287_R3659
61.5
Non-Vd2 gdTCR nTPM: 82.2
Samples: 4
Max nTPM: 96.6
Min nTPM: 63.8
RHH5235_R3607
63.8
RHH5264_R3636
96.6
RHH5207_R3578
92.8
RHH5299_R3665
75.6
T-reg nTPM: 82.0
Samples: 4
Max nTPM: 101.1
Min nTPM: 61.3
RHH5301_R3667
61.3
RHH5237_R3609
101.1
RHH5266_R3638
77.8
RHH5209_R3580
87.6
Terminal effector memory CD4 T-cell nTPM: 104.8
Samples: 2
Max nTPM: 107.8
Min nTPM: 101.7
RHH5243_R3615
107.8
RHH5272_R3644
101.7
Terminal effector memory CD8 T-cell nTPM: 89.5
Samples: 4
Max nTPM: 106.9
Min nTPM: 72.1
RHH5232_R3604
106.9
RHH5204_R3575
72.1
RHH5261_R3633
83.9
RHH5296_R3662
95.0
Vd2 gdTCR nTPM: 97.2
Samples: 4
Max nTPM: 106.2
Min nTPM: 91.0
RHH5234_R3606
92.0
RHH5206_R3577
106.2
RHH5263_R3635
99.7
RHH5298_R3664
91.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
