HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:14.0 nTPM
HPA Brain:114.5 nTPM
GTEx:14.0 nTPM
FANTOM5:47.8 Scaled Tags Per Million
Pig:55.0 nTPM
Mouse:28.4 nTPM
Allen mouse:9.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA015555Antibody HPA016519Antibody CAB017813
Glial cells Not detectedNot detectedNot detected
Neuronal cells MediumNot detectedNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 114.5
Sample id Sample description nTPM
Hippocampus
nTPM: 106.0
2621 Female, age 67, right hemisphere 130.0
2148 Female, age 91, left hemisphere 113.9
2529 Female, age 94, left hemisphere 112.3
1911 Female, age 85, right hemisphere 98.1
1898 Male, age 80, left hemisphere 93.3
1855 Male, age 76, left hemisphere 88.2
Dentate gyrus
nTPM: 106.1
2531 Female, age 67, both hemispheres 126.4
2528 Male, age 74, both hemispheres 116.1
1927 Female, age 91, both hemispheres 110.2
2530 Female, age 94, left hemisphere 108.2
2246 Female, age 85, both hemispheres 98.9
2010 Male, age 76, both hemispheres 76.9
Entorhinal gyrus
nTPM: 111.0
2613 Female, age 94, left hemisphere 173.3
2764 Male, age 80, right hemisphere 119.0
1787 Male, age 76, left hemisphere 104.1
2686 Male, age 75, right hemisphere 103.1
1938 Female, age 85, left hemisphere 96.4
2117 Female, age 91, right hemisphere 70.3
Hippocampus, CA1
nTPM: 105.8
2749 Male, age 80, left hemisphere 130.8
2527 Male, age 74, both hemispheres 119.2
1873 Female, age 85, both hemispheres 102.3
2082 Female, age 91, right hemisphere 92.1
2045 Male, age 76, both hemispheres 84.4
Hippocampus, CA2
nTPM: 97.9
1963 Male, age 80, left hemisphere 111.1
2437 Female, age 94, left hemisphere 106.5
2249 Male, age 74, both hemispheres 99.7
2113 Female, age 91, right hemisphere 96.8
1892 Male, age 76, both hemispheres 91.5
1940 Female, age 85, left hemisphere 81.6
Hippocampus, CA3
nTPM: 114.5
2620 Female, age 94, left hemisphere 158.4
2861 Female, age 67, both hemispheres 150.1
2137 Male, age 80, left hemisphere 120.1
2436 Male, age 74, both hemispheres 95.0
1867 Male, age 76, both hemispheres 82.2
1891 Female, age 85, both hemispheres 81.1
Parahippocampal cortex
nTPM: 101.9
2622 Female, age 67, right hemisphere 132.3
2245 Female, age 91, both hemispheres 127.8
1990 Female, age 91, right hemisphere 104.1
2250 Female, age 67, right hemisphere 102.6
2692 Male, age 74, both hemispheres 100.0
2693 Female, age 94, both hemispheres 98.4
1933 Female, age 85, both hemispheres 95.2
2532 Female, age 72, left hemisphere 89.4
1850 Male, age 80, both hemispheres 87.1
2018 Male, age 76, both hemispheres 81.8
Perirhinal gyrus
nTPM: 99.5
1847 Female, age 91, left hemisphere 119.4
2521 Female, age 94, right hemisphere 104.6
1794 Male, age 80, right hemisphere 100.5
1841 Female, age 85, right hemisphere 88.2
2848 Male, age 76, right hemisphere 84.7
Subiculum
nTPM: 89.8
2438 Female, age 94, left hemisphere 107.7
2619 Male, age 74, both hemispheres 102.3
1977 Female, age 85, both hemispheres 91.2
1901 Male, age 80, both hemispheres 85.8
2729 Female, age 91, right hemisphere 85.4
2042 Male, age 76, both hemispheres 66.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.0
Samples: 197

Max nTPM: 32.2
Min nTPM: 1.6
Std nTPM: 6.8
Median nTPM: 14.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 32.2
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 30.5
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 30.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 28.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 28.1
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 27.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 27.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 27.2
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 27.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 25.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 25.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 47.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 47.8
FF:10153-102I9 76 years, female 47.8
FF:10169-103B7 60 years, female 47.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 55.0
Pig sample Sample description nTPM
Subiculum
nTPM: 46.7
Samples: 4

Max nTPM: 56.3
Min nTPM: 38.7
Sample A Female 56.3
Sample B Female 38.7
Sample C Male 51.2
Sample D Male 40.6
Dorsal hippocampus
nTPM: 42.3
Samples: 4

Max nTPM: 48.3
Min nTPM: 32.2
Sample A Female 48.3
Sample B Female 48.2
Sample C Male 32.2
Sample D Male 40.3
Entorhinal cortex
nTPM: 55.0
Samples: 4

Max nTPM: 60.6
Min nTPM: 45.8
Sample A Female 60.6
Sample B Female 45.8
Sample C Male 59.0
Sample D Male 54.7
Ventral hippocampus
nTPM: 46.8
Samples: 4

Max nTPM: 56.7
Min nTPM: 35.3
Sample A Female 40.7
Sample B Female 35.3
Sample C Male 56.7
Sample D Male 54.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 28.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 28.4
Samples: 4

Max nTPM: 32.4
Min nTPM: 25.3
Sample A Male 28.3
Sample B Male 27.6
Sample C Female 25.3
Sample D Female 32.4
Hippocampal formation
nTPM: 21.3
Samples: 4

Max nTPM: 22.8
Min nTPM: 18.0
Sample A Male 18.0
Sample B Male 21.9
Sample C Female 22.3
Sample D Female 22.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.0
68861954 Antisense, RP_050301_01_C03, Mouse strain C57BL/6J (56 days, male) 9.0

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