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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
91.3
nTPM
Monaco:
111.5
nTPM
Schmiedel:
275.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
91.3
HPA sample
nTPM
gdT-cell nTPM: 58.8
Samples: 6
Max nTPM: 82.6
Min nTPM: 51.1
P10809_1007
52.2
P10809_1022
82.6
P10809_1041
53.2
P10809_1060
51.1
P10809_1077
60.7
P10809_1098
53.2
MAIT T-cell nTPM: 62.4
Samples: 6
Max nTPM: 71.9
Min nTPM: 46.7
P10809_1006
71.9
P10809_1024
70.5
P10809_1043
63.1
P10809_1062
68.4
P10809_1083
46.7
P10809_1097
54.0
Memory CD4 T-cell nTPM: 59.2
Samples: 6
Max nTPM: 67.0
Min nTPM: 51.4
P10809_1014
67.0
P10809_1026
61.1
P10809_1045
51.4
P10809_1064
58.2
P10809_1086
59.5
P10809_1113
57.8
Memory CD8 T-cell nTPM: 65.4
Samples: 5
Max nTPM: 80.5
Min nTPM: 57.0
P10809_1012
80.5
P10809_1027
65.2
P10809_1046
59.6
P10809_1065
57.0
P10809_1111
64.7
Naive CD4 T-cell nTPM: 42.3
Samples: 6
Max nTPM: 48.0
Min nTPM: 33.7
P10809_1015
45.2
P10809_1030
33.7
P10809_1049
39.4
P10809_1068
42.8
P10809_1085
44.5
P10809_1112
48.0
Naive CD8 T-cell nTPM: 44.5
Samples: 6
Max nTPM: 52.0
Min nTPM: 37.8
P10809_1016
43.5
P10809_1031
37.8
P10809_1050
38.2
P10809_1069
52.0
P10809_1087
51.0
P10809_1110
44.5
T-reg nTPM: 91.3
Samples: 6
Max nTPM: 128.1
Min nTPM: 61.9
P10809_1018
128.1
P10809_1037
77.1
P10809_1056
61.9
P10809_1075
97.3
P10809_1094
103.7
P10809_1106
79.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
111.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 84.3
Samples: 4
Max nTPM: 107.4
Min nTPM: 62.9
RHH5202_R3573
62.9
RHH5230_R3602
66.2
RHH5259_R3631
100.7
RHH5288_R3660
107.4
Effector memory CD8 T-cell nTPM: 104.2
Samples: 4
Max nTPM: 124.4
Min nTPM: 76.5
RHH5203_R3574
93.8
RHH5231_R3603
124.4
RHH5260_R3632
121.9
RHH5289_R3661
76.5
MAIT T-cell nTPM: 76.7
Samples: 4
Max nTPM: 92.9
Min nTPM: 49.7
RHH5233_R3605
76.6
RHH5205_R3576
87.4
RHH5262_R3634
92.9
RHH5297_R3663
49.7
Memory CD4 T-cell TFH nTPM: 94.5
Samples: 4
Max nTPM: 107.8
Min nTPM: 76.1
RHH5300_R3666
86.9
RHH5236_R3608
107.0
RHH5265_R3637
107.8
RHH5208_R3579
76.1
Memory CD4 T-cell Th1 nTPM: 85.9
Samples: 4
Max nTPM: 118.8
Min nTPM: 64.1
RHH5210_R3581
64.1
RHH5302_R3668
69.0
RHH5238_R3610
118.8
RHH5267_R3639
91.5
Memory CD4 T-cell Th1/Th17 nTPM: 87.8
Samples: 4
Max nTPM: 117.8
Min nTPM: 63.0
RHH5303_R3669
63.0
RHH5211_R3582
71.2
RHH5239_R3611
117.8
RHH5268_R3640
99.1
Memory CD4 T-cell Th17 nTPM: 111.3
Samples: 4
Max nTPM: 145.2
Min nTPM: 77.8
RHH5304_R3670
77.8
RHH5212_R3583
121.3
RHH5240_R3612
101.0
RHH5269_R3641
145.2
Memory CD4 T-cell Th2 nTPM: 93.4
Samples: 4
Max nTPM: 103.3
Min nTPM: 77.6
RHH5305_R3671
90.4
RHH5213_R3584
103.3
RHH5241_R3613
77.6
RHH5270_R3642
102.2
Naive CD4 T-cell nTPM: 84.4
Samples: 4
Max nTPM: 90.2
Min nTPM: 78.2
RHH5306_R3672
78.2
RHH5214_R3585
79.7
RHH5242_R3614
90.2
RHH5271_R3643
89.3
Naive CD8 T-cell nTPM: 80.3
Samples: 4
Max nTPM: 95.1
Min nTPM: 70.2
RHH5201_R3572
70.2
RHH5229_R3601
95.1
RHH5258_R3630
85.1
RHH5287_R3659
70.8
Non-Vd2 gdTCR nTPM: 104.3
Samples: 4
Max nTPM: 123.5
Min nTPM: 91.3
RHH5235_R3607
101.3
RHH5264_R3636
100.9
RHH5207_R3578
123.5
RHH5299_R3665
91.3
T-reg nTPM: 81.5
Samples: 4
Max nTPM: 94.6
Min nTPM: 69.7
RHH5301_R3667
70.0
RHH5237_R3609
91.8
RHH5266_R3638
94.6
RHH5209_R3580
69.7
Terminal effector memory CD4 T-cell nTPM: 111.6
Samples: 2
Max nTPM: 123.9
Min nTPM: 99.2
RHH5243_R3615
123.9
RHH5272_R3644
99.2
Terminal effector memory CD8 T-cell nTPM: 109.2
Samples: 4
Max nTPM: 121.1
Min nTPM: 94.7
RHH5232_R3604
94.7
RHH5204_R3575
100.8
RHH5261_R3633
120.0
RHH5296_R3662
121.1
Vd2 gdTCR nTPM: 88.3
Samples: 4
Max nTPM: 120.3
Min nTPM: 69.3
RHH5234_R3606
120.3
RHH5206_R3577
69.3
RHH5263_R3635
93.4
RHH5298_R3664
70.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
