HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:15.5 nTPM
HPA Brain:13.2 nTPM
GTEx:15.5 nTPM
FANTOM5:59.0 Scaled Tags Per Million
Pig:10.5 nTPM
Mouse:62.9 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.2
Sample id Sample description nTPM
Hippocampus
nTPM: 13.2
1898 Male, age 80, left hemisphere 15.5
1911 Female, age 85, right hemisphere 15.3
1855 Male, age 76, left hemisphere 15.2
2529 Female, age 94, left hemisphere 12.4
2148 Female, age 91, left hemisphere 11.2
2621 Female, age 67, right hemisphere 9.5
Dentate gyrus
nTPM: 12.8
2010 Male, age 76, both hemispheres 15.9
2530 Female, age 94, left hemisphere 14.6
2528 Male, age 74, both hemispheres 14.2
2246 Female, age 85, both hemispheres 11.8
1927 Female, age 91, both hemispheres 11.2
2531 Female, age 67, both hemispheres 9.4
Entorhinal gyrus
nTPM: 11.0
2117 Female, age 91, right hemisphere 15.0
1938 Female, age 85, left hemisphere 12.5
1787 Male, age 76, left hemisphere 11.2
2686 Male, age 75, right hemisphere 9.9
2613 Female, age 94, left hemisphere 9.2
2764 Male, age 80, right hemisphere 8.5
Hippocampus, CA1
nTPM: 12.8
1873 Female, age 85, both hemispheres 14.9
2527 Male, age 74, both hemispheres 12.9
2749 Male, age 80, left hemisphere 12.7
2082 Female, age 91, right hemisphere 12.3
2045 Male, age 76, both hemispheres 11.1
Hippocampus, CA2
nTPM: 12.8
2249 Male, age 74, both hemispheres 17.3
1940 Female, age 85, left hemisphere 14.9
2113 Female, age 91, right hemisphere 11.5
1963 Male, age 80, left hemisphere 11.3
1892 Male, age 76, both hemispheres 11.0
2437 Female, age 94, left hemisphere 10.9
Hippocampus, CA3
nTPM: 12.5
2137 Male, age 80, left hemisphere 15.2
2436 Male, age 74, both hemispheres 14.7
1891 Female, age 85, both hemispheres 14.2
1867 Male, age 76, both hemispheres 11.4
2861 Female, age 67, both hemispheres 10.1
2620 Female, age 94, left hemisphere 9.2
Parahippocampal cortex
nTPM: 11.5
2250 Female, age 67, right hemisphere 14.3
2693 Female, age 94, both hemispheres 13.1
1933 Female, age 85, both hemispheres 13.0
1850 Male, age 80, both hemispheres 11.6
2018 Male, age 76, both hemispheres 11.5
1990 Female, age 91, right hemisphere 10.8
2692 Male, age 74, both hemispheres 10.8
2245 Female, age 91, both hemispheres 10.7
2532 Female, age 72, left hemisphere 9.6
2622 Female, age 67, right hemisphere 9.1
Perirhinal gyrus
nTPM: 11.0
1841 Female, age 85, right hemisphere 13.4
2521 Female, age 94, right hemisphere 12.1
2848 Male, age 76, right hemisphere 10.3
1794 Male, age 80, right hemisphere 9.7
1847 Female, age 91, left hemisphere 9.5
Subiculum
nTPM: 12.6
1901 Male, age 80, both hemispheres 15.6
2729 Female, age 91, right hemisphere 14.1
2042 Male, age 76, both hemispheres 13.8
1977 Female, age 85, both hemispheres 12.2
2438 Female, age 94, left hemisphere 11.5
2619 Male, age 74, both hemispheres 8.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.5
Samples: 197

Max nTPM: 34.4
Min nTPM: 8.9
Std nTPM: 4.9
Median nTPM: 14.3
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 34.4
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 34.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 31.6
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 31.4
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 30.2
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 30.2
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 29.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 29.2
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 28.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 26.3
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 23.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 59.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 59.0
FF:10169-103B7 60 years, female 61.2
FF:10153-102I9 76 years, female 56.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 10.5
Pig sample Sample description nTPM
Subiculum
nTPM: 10.5
Samples: 4

Max nTPM: 12.1
Min nTPM: 8.7
Sample A Female 8.7
Sample B Female 10.8
Sample C Male 10.3
Sample D Male 12.1
Dorsal hippocampus
nTPM: 9.6
Samples: 4

Max nTPM: 9.9
Min nTPM: 9.3
Sample A Female 9.5
Sample B Female 9.9
Sample C Male 9.8
Sample D Male 9.3
Entorhinal cortex
nTPM: 9.9
Samples: 4

Max nTPM: 10.2
Min nTPM: 9.4
Sample A Female 9.4
Sample B Female 10.2
Sample C Male 10.2
Sample D Male 9.8
Ventral hippocampus
nTPM: 9.3
Samples: 4

Max nTPM: 10.1
Min nTPM: 7.8
Sample A Female 9.0
Sample B Female 10.1
Sample C Male 7.8
Sample D Male 10.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 62.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 53.5
Samples: 4

Max nTPM: 57.1
Min nTPM: 48.7
Sample A Male 54.5
Sample B Male 53.7
Sample C Female 57.1
Sample D Female 48.7
Hippocampal formation
nTPM: 62.9
Samples: 4

Max nTPM: 65.7
Min nTPM: 60.1
Sample A Male 65.7
Sample B Male 60.1
Sample C Female 63.1
Sample D Female 62.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
74003413 Antisense, RP_051017_01_C02, Mouse strain C57BL/6J (56 days, male) 0.5
72081396 Antisense, RP_051017_01_C02, Mouse strain C57BL/6J (56 days, male) 0.3
80341208 Antisense, RP_071018_02_B08, Mouse strain C57BL/6J (56 days, male) 0.1

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