HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:24.9 nTPM
HPA Brain:65.4 nTPM
GTEx:24.9 nTPM
FANTOM5:26.1 Scaled Tags Per Million
Pig:18.8 nTPM
Mouse:14.6 nTPM
Allen mouse:0.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA037601
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 65.4
Sample id Sample description nTPM
Hippocampus
nTPM: 65.4
2529 Female, age 94, left hemisphere 85.2
1855 Male, age 76, left hemisphere 70.0
2148 Female, age 91, left hemisphere 66.4
1911 Female, age 85, right hemisphere 61.0
1898 Male, age 80, left hemisphere 55.8
2621 Female, age 67, right hemisphere 54.0
Dentate gyrus
nTPM: 56.1
2530 Female, age 94, left hemisphere 71.2
2528 Male, age 74, both hemispheres 65.3
2246 Female, age 85, both hemispheres 56.1
2010 Male, age 76, both hemispheres 52.2
1927 Female, age 91, both hemispheres 47.3
2531 Female, age 67, both hemispheres 44.9
Entorhinal gyrus
nTPM: 62.7
2117 Female, age 91, right hemisphere 82.2
2686 Male, age 75, right hemisphere 65.9
1787 Male, age 76, left hemisphere 64.3
2764 Male, age 80, right hemisphere 59.6
1938 Female, age 85, left hemisphere 52.2
2613 Female, age 94, left hemisphere 52.0
Hippocampus, CA1
nTPM: 49.7
2527 Male, age 74, both hemispheres 59.7
2082 Female, age 91, right hemisphere 58.4
1873 Female, age 85, both hemispheres 49.3
2749 Male, age 80, left hemisphere 40.9
2045 Male, age 76, both hemispheres 40.4
Hippocampus, CA2
nTPM: 61.0
2437 Female, age 94, left hemisphere 75.4
1940 Female, age 85, left hemisphere 73.5
2113 Female, age 91, right hemisphere 66.7
2249 Male, age 74, both hemispheres 60.0
1963 Male, age 80, left hemisphere 55.0
1892 Male, age 76, both hemispheres 35.5
Hippocampus, CA3
nTPM: 53.6
2436 Male, age 74, both hemispheres 65.4
2861 Female, age 67, both hemispheres 63.8
1891 Female, age 85, both hemispheres 62.9
1867 Male, age 76, both hemispheres 47.4
2620 Female, age 94, left hemisphere 44.6
2137 Male, age 80, left hemisphere 37.7
Parahippocampal cortex
nTPM: 54.9
2622 Female, age 67, right hemisphere 74.6
2250 Female, age 67, right hemisphere 65.5
2692 Male, age 74, both hemispheres 65.5
1990 Female, age 91, right hemisphere 54.2
2018 Male, age 76, both hemispheres 53.7
1933 Female, age 85, both hemispheres 52.7
2245 Female, age 91, both hemispheres 48.3
2532 Female, age 72, left hemisphere 45.0
1850 Male, age 80, both hemispheres 44.9
2693 Female, age 94, both hemispheres 44.6
Perirhinal gyrus
nTPM: 45.4
2521 Female, age 94, right hemisphere 50.9
1794 Male, age 80, right hemisphere 47.5
1847 Female, age 91, left hemisphere 45.3
1841 Female, age 85, right hemisphere 42.1
2848 Male, age 76, right hemisphere 41.1
Subiculum
nTPM: 57.9
2729 Female, age 91, right hemisphere 74.6
2619 Male, age 74, both hemispheres 64.6
2042 Male, age 76, both hemispheres 62.2
1901 Male, age 80, both hemispheres 51.8
1977 Female, age 85, both hemispheres 47.5
2438 Female, age 94, left hemisphere 46.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 24.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.9
Samples: 197

Max nTPM: 51.7
Min nTPM: 10.7
Std nTPM: 7.9
Median nTPM: 23.8
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 51.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 49.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 47.1
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 46.9
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 44.4
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 43.2
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 42.5
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 41.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 40.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 40.4
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 38.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 26.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 26.1
FF:10153-102I9 76 years, female 39.8
FF:10169-103B7 60 years, female 12.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.8
Pig sample Sample description nTPM
Subiculum
nTPM: 18.5
Samples: 4

Max nTPM: 21.0
Min nTPM: 16.9
Sample A Female 21.0
Sample B Female 16.9
Sample C Male 18.2
Sample D Male 17.7
Dorsal hippocampus
nTPM: 15.3
Samples: 4

Max nTPM: 19.3
Min nTPM: 11.0
Sample A Female 19.3
Sample B Female 12.9
Sample C Male 17.8
Sample D Male 11.0
Entorhinal cortex
nTPM: 16.5
Samples: 4

Max nTPM: 19.3
Min nTPM: 13.2
Sample A Female 19.3
Sample B Female 16.2
Sample C Male 17.4
Sample D Male 13.2
Ventral hippocampus
nTPM: 18.8
Samples: 4

Max nTPM: 26.2
Min nTPM: 14.3
Sample A Female 18.4
Sample B Female 14.3
Sample C Male 26.2
Sample D Male 16.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 14.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 11.6
Samples: 4

Max nTPM: 14.3
Min nTPM: 9.2
Sample A Male 14.3
Sample B Male 11.9
Sample C Female 10.9
Sample D Female 9.2
Hippocampal formation
nTPM: 14.6
Samples: 4

Max nTPM: 15.9
Min nTPM: 13.7
Sample A Male 14.2
Sample B Male 13.7
Sample C Female 15.9
Sample D Female 14.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.8
75694364 Antisense, RP_060518_03_F06, Mouse strain C57BL/6J (56 days, male) 0.8

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