HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:24.9 nTPM
HPA Brain:25.2 nTPM
GTEx:24.9 nTPM
FANTOM5:68.4 Scaled Tags Per Million
Pig:42.7 nTPM
Mouse:19.9 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045511
Glial cells Not detected
Neuronal cells Low


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 25.2
Sample id Sample description nTPM
Hippocampus
nTPM: 25.2
2529 Female, age 94, left hemisphere 26.1
2148 Female, age 91, left hemisphere 25.8
1911 Female, age 85, right hemisphere 25.2
2621 Female, age 67, right hemisphere 25.2
1898 Male, age 80, left hemisphere 25.0
1855 Male, age 76, left hemisphere 24.0
Dentate gyrus
nTPM: 23.2
2531 Female, age 67, both hemispheres 27.8
1927 Female, age 91, both hemispheres 24.1
2246 Female, age 85, both hemispheres 24.0
2010 Male, age 76, both hemispheres 23.2
2530 Female, age 94, left hemisphere 22.0
2528 Male, age 74, both hemispheres 18.4
Entorhinal gyrus
nTPM: 21.7
2117 Female, age 91, right hemisphere 25.6
2764 Male, age 80, right hemisphere 24.1
1938 Female, age 85, left hemisphere 23.4
2686 Male, age 75, right hemisphere 19.9
1787 Male, age 76, left hemisphere 19.1
2613 Female, age 94, left hemisphere 18.4
Hippocampus, CA1
nTPM: 24.0
2749 Male, age 80, left hemisphere 26.6
2527 Male, age 74, both hemispheres 24.6
2045 Male, age 76, both hemispheres 23.6
1873 Female, age 85, both hemispheres 23.0
2082 Female, age 91, right hemisphere 22.5
Hippocampus, CA2
nTPM: 22.6
1892 Male, age 76, both hemispheres 24.0
1940 Female, age 85, left hemisphere 23.3
2113 Female, age 91, right hemisphere 23.3
2249 Male, age 74, both hemispheres 23.2
1963 Male, age 80, left hemisphere 22.0
2437 Female, age 94, left hemisphere 19.7
Hippocampus, CA3
nTPM: 25.0
2620 Female, age 94, left hemisphere 29.5
2436 Male, age 74, both hemispheres 27.4
1867 Male, age 76, both hemispheres 24.9
2861 Female, age 67, both hemispheres 24.0
1891 Female, age 85, both hemispheres 23.6
2137 Male, age 80, left hemisphere 20.5
Parahippocampal cortex
nTPM: 23.7
2693 Female, age 94, both hemispheres 26.7
2245 Female, age 91, both hemispheres 24.9
2622 Female, age 67, right hemisphere 24.6
1850 Male, age 80, both hemispheres 24.5
1933 Female, age 85, both hemispheres 24.5
2532 Female, age 72, left hemisphere 24.1
1990 Female, age 91, right hemisphere 23.1
2018 Male, age 76, both hemispheres 22.8
2250 Female, age 67, right hemisphere 21.3
2692 Male, age 74, both hemispheres 20.0
Perirhinal gyrus
nTPM: 23.2
1794 Male, age 80, right hemisphere 27.3
1841 Female, age 85, right hemisphere 24.3
1847 Female, age 91, left hemisphere 22.2
2521 Female, age 94, right hemisphere 21.3
2848 Male, age 76, right hemisphere 21.2
Subiculum
nTPM: 23.9
2438 Female, age 94, left hemisphere 31.4
1977 Female, age 85, both hemispheres 24.2
2042 Male, age 76, both hemispheres 23.7
2619 Male, age 74, both hemispheres 21.7
2729 Female, age 91, right hemisphere 21.3
1901 Male, age 80, both hemispheres 21.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 24.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.9
Samples: 197

Max nTPM: 40.4
Min nTPM: 15.1
Std nTPM: 4.4
Median nTPM: 24.3
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 40.4
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 40.1
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 36.4
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 36.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 35.8
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 33.7
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 33.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 33.1
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 33.1
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 33.0
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 32.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 68.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 68.4
FF:10169-103B7 60 years, female 74.7
FF:10153-102I9 76 years, female 62.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 42.7
Pig sample Sample description nTPM
Subiculum
nTPM: 34.5
Samples: 4

Max nTPM: 42.1
Min nTPM: 30.5
Sample A Female 42.1
Sample B Female 33.6
Sample C Male 30.5
Sample D Male 31.8
Dorsal hippocampus
nTPM: 42.7
Samples: 4

Max nTPM: 53.1
Min nTPM: 32.9
Sample A Female 53.1
Sample B Female 42.4
Sample C Male 42.4
Sample D Male 32.9
Entorhinal cortex
nTPM: 34.2
Samples: 4

Max nTPM: 41.5
Min nTPM: 27.1
Sample A Female 35.3
Sample B Female 41.5
Sample C Male 32.8
Sample D Male 27.1
Ventral hippocampus
nTPM: 36.7
Samples: 4

Max nTPM: 39.7
Min nTPM: 31.1
Sample A Female 36.7
Sample B Female 31.1
Sample C Male 39.4
Sample D Male 39.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 19.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.2
Samples: 4

Max nTPM: 18.7
Min nTPM: 17.7
Sample A Male 18.7
Sample B Male 18.0
Sample C Female 18.2
Sample D Female 17.7
Hippocampal formation
nTPM: 19.9
Samples: 4

Max nTPM: 21.6
Min nTPM: 18.9
Sample A Male 20.1
Sample B Male 19.0
Sample C Female 21.6
Sample D Female 18.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
1946 Antisense, RP_040604_01_A04, Mouse strain C57BL/6J (56 days, male) 0.2
1947 Antisense, RP_040604_01_A04, Mouse strain C57BL/6J (56 days, male) 0.2

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