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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
1115.7
nTPM
Monaco:
181.2
nTPM
Schmiedel:
1031.4
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1115.7
HPA sample
nTPM
gdT-cell nTPM: 825.9
Samples: 6
Max nTPM: 938.1
Min nTPM: 681.8
P10809_1007
938.1
P10809_1022
728.0
P10809_1041
924.1
P10809_1060
681.8
P10809_1077
850.2
P10809_1098
833.4
MAIT T-cell nTPM: 1115.7
Samples: 6
Max nTPM: 1305.1
Min nTPM: 905.2
P10809_1006
905.2
P10809_1024
1301.2
P10809_1043
1030.7
P10809_1062
1156.7
P10809_1083
995.3
P10809_1097
1305.1
Memory CD4 T-cell nTPM: 1073.7
Samples: 6
Max nTPM: 1239.8
Min nTPM: 949.3
P10809_1014
1113.6
P10809_1026
1239.8
P10809_1045
949.3
P10809_1064
1087.6
P10809_1086
1063.5
P10809_1113
988.6
Memory CD8 T-cell nTPM: 1040.8
Samples: 5
Max nTPM: 1319.6
Min nTPM: 896.7
P10809_1012
989.5
P10809_1027
1319.6
P10809_1046
896.7
P10809_1065
1055.4
P10809_1111
942.8
Naive CD4 T-cell nTPM: 987.8
Samples: 6
Max nTPM: 1255.3
Min nTPM: 789.9
P10809_1015
1086.9
P10809_1030
1255.3
P10809_1049
909.8
P10809_1068
1036.0
P10809_1085
848.9
P10809_1112
789.9
Naive CD8 T-cell nTPM: 940.8
Samples: 6
Max nTPM: 1107.6
Min nTPM: 719.0
P10809_1016
1107.6
P10809_1031
1096.3
P10809_1050
779.0
P10809_1069
1009.3
P10809_1087
933.7
P10809_1110
719.0
T-reg nTPM: 1099.5
Samples: 6
Max nTPM: 1290.2
Min nTPM: 840.6
P10809_1018
840.6
P10809_1037
1290.2
P10809_1056
1223.9
P10809_1075
1146.9
P10809_1094
1025.0
P10809_1106
1070.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
181.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 111.0
Samples: 4
Max nTPM: 171.8
Min nTPM: 62.5
RHH5202_R3573
62.5
RHH5230_R3602
119.2
RHH5259_R3631
171.8
RHH5288_R3660
90.6
Effector memory CD8 T-cell nTPM: 86.5
Samples: 4
Max nTPM: 145.0
Min nTPM: 51.8
RHH5203_R3574
81.5
RHH5231_R3603
51.8
RHH5260_R3632
145.0
RHH5289_R3661
67.6
MAIT T-cell nTPM: 108.2
Samples: 4
Max nTPM: 141.9
Min nTPM: 56.8
RHH5233_R3605
56.8
RHH5205_R3576
141.9
RHH5262_R3634
128.7
RHH5297_R3663
105.4
Memory CD4 T-cell TFH nTPM: 91.5
Samples: 4
Max nTPM: 116.9
Min nTPM: 65.0
RHH5300_R3666
98.5
RHH5236_R3608
116.9
RHH5265_R3637
65.0
RHH5208_R3579
85.7
Memory CD4 T-cell Th1 nTPM: 144.8
Samples: 4
Max nTPM: 225.6
Min nTPM: 69.9
RHH5210_R3581
69.9
RHH5302_R3668
120.1
RHH5238_R3610
225.6
RHH5267_R3639
163.7
Memory CD4 T-cell Th1/Th17 nTPM: 139.7
Samples: 4
Max nTPM: 193.4
Min nTPM: 94.3
RHH5303_R3669
119.3
RHH5211_R3582
94.3
RHH5239_R3611
151.8
RHH5268_R3640
193.4
Memory CD4 T-cell Th17 nTPM: 122.0
Samples: 4
Max nTPM: 147.8
Min nTPM: 105.2
RHH5304_R3670
147.8
RHH5212_R3583
105.2
RHH5240_R3612
122.0
RHH5269_R3641
113.1
Memory CD4 T-cell Th2 nTPM: 125.3
Samples: 4
Max nTPM: 164.4
Min nTPM: 89.2
RHH5305_R3671
164.4
RHH5213_R3584
136.1
RHH5241_R3613
89.2
RHH5270_R3642
111.4
Naive CD4 T-cell nTPM: 124.5
Samples: 4
Max nTPM: 163.5
Min nTPM: 89.9
RHH5306_R3672
131.5
RHH5214_R3585
163.5
RHH5242_R3614
89.9
RHH5271_R3643
113.0
Naive CD8 T-cell nTPM: 97.6
Samples: 4
Max nTPM: 155.8
Min nTPM: 52.6
RHH5201_R3572
52.6
RHH5229_R3601
155.8
RHH5258_R3630
58.9
RHH5287_R3659
123.1
Non-Vd2 gdTCR nTPM: 96.9
Samples: 4
Max nTPM: 114.8
Min nTPM: 80.6
RHH5235_R3607
114.8
RHH5264_R3636
93.0
RHH5207_R3578
99.2
RHH5299_R3665
80.6
T-reg nTPM: 107.7
Samples: 4
Max nTPM: 146.5
Min nTPM: 79.8
RHH5301_R3667
86.0
RHH5237_R3609
79.8
RHH5266_R3638
118.6
RHH5209_R3580
146.5
Terminal effector memory CD4 T-cell nTPM: 103.8
Samples: 2
Max nTPM: 128.3
Min nTPM: 79.3
RHH5243_R3615
128.3
RHH5272_R3644
79.3
Terminal effector memory CD8 T-cell nTPM: 126.1
Samples: 4
Max nTPM: 201.8
Min nTPM: 35.0
RHH5232_R3604
35.0
RHH5204_R3575
192.4
RHH5261_R3633
201.8
RHH5296_R3662
75.3
Vd2 gdTCR nTPM: 181.2
Samples: 4
Max nTPM: 352.8
Min nTPM: 92.0
RHH5234_R3606
92.0
RHH5206_R3577
352.8
RHH5263_R3635
152.4
RHH5298_R3664
127.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
