HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:40.3 nTPM
HPA Brain:93.3 nTPM
GTEx:40.3 nTPM
FANTOM5:71.9 Scaled Tags Per Million
Pig:63.3 nTPM
Mouse:15.6 nTPM
Allen mouse:11.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039458
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 93.3
Sample id Sample description nTPM
Hippocampus
nTPM: 67.4
1911 Female, age 85, right hemisphere 87.8
2529 Female, age 94, left hemisphere 74.9
1855 Male, age 76, left hemisphere 66.3
2621 Female, age 67, right hemisphere 64.0
2148 Female, age 91, left hemisphere 58.7
1898 Male, age 80, left hemisphere 52.7
Dentate gyrus
nTPM: 67.9
2530 Female, age 94, left hemisphere 84.0
2528 Male, age 74, both hemispheres 77.0
2246 Female, age 85, both hemispheres 69.4
2010 Male, age 76, both hemispheres 66.6
2531 Female, age 67, both hemispheres 58.3
1927 Female, age 91, both hemispheres 52.0
Entorhinal gyrus
nTPM: 72.1
2117 Female, age 91, right hemisphere 109.7
2764 Male, age 80, right hemisphere 77.5
1938 Female, age 85, left hemisphere 70.0
2613 Female, age 94, left hemisphere 60.0
2686 Male, age 75, right hemisphere 59.3
1787 Male, age 76, left hemisphere 56.1
Hippocampus, CA1
nTPM: 59.5
2527 Male, age 74, both hemispheres 75.1
1873 Female, age 85, both hemispheres 67.9
2082 Female, age 91, right hemisphere 66.8
2045 Male, age 76, both hemispheres 45.4
2749 Male, age 80, left hemisphere 42.4
Hippocampus, CA2
nTPM: 67.4
2113 Female, age 91, right hemisphere 75.6
2249 Male, age 74, both hemispheres 75.4
1963 Male, age 80, left hemisphere 75.1
2437 Female, age 94, left hemisphere 65.6
1940 Female, age 85, left hemisphere 63.5
1892 Male, age 76, both hemispheres 49.1
Hippocampus, CA3
nTPM: 59.5
1891 Female, age 85, both hemispheres 114.0
2436 Male, age 74, both hemispheres 58.1
1867 Male, age 76, both hemispheres 56.7
2620 Female, age 94, left hemisphere 47.3
2861 Female, age 67, both hemispheres 42.1
2137 Male, age 80, left hemisphere 38.6
Parahippocampal cortex
nTPM: 66.3
2692 Male, age 74, both hemispheres 90.5
1990 Female, age 91, right hemisphere 85.6
2532 Female, age 72, left hemisphere 76.0
1933 Female, age 85, both hemispheres 69.9
2245 Female, age 91, both hemispheres 68.0
1850 Male, age 80, both hemispheres 62.3
2018 Male, age 76, both hemispheres 61.9
2693 Female, age 94, both hemispheres 58.1
2250 Female, age 67, right hemisphere 52.8
2622 Female, age 67, right hemisphere 38.0
Perirhinal gyrus
nTPM: 52.5
2848 Male, age 76, right hemisphere 60.9
2521 Female, age 94, right hemisphere 55.4
1841 Female, age 85, right hemisphere 53.1
1847 Female, age 91, left hemisphere 48.9
1794 Male, age 80, right hemisphere 44.2
Subiculum
nTPM: 93.3
2042 Male, age 76, both hemispheres 119.4
1901 Male, age 80, both hemispheres 107.0
1977 Female, age 85, both hemispheres 98.0
2438 Female, age 94, left hemisphere 88.9
2619 Male, age 74, both hemispheres 78.5
2729 Female, age 91, right hemisphere 67.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 40.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 40.3
Samples: 197

Max nTPM: 180.8
Min nTPM: 10.5
Std nTPM: 23.6
Median nTPM: 33.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 180.8
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 126.8
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 115.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 110.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 105.3
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 89.5
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 89.3
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 89.2
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 84.8
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 83.1
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 81.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 71.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 71.9
FF:10153-102I9 76 years, female 121.0
FF:10169-103B7 60 years, female 22.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 63.3
Pig sample Sample description nTPM
Subiculum
nTPM: 37.2
Samples: 4

Max nTPM: 46.7
Min nTPM: 32.8
Sample A Female 46.7
Sample B Female 34.5
Sample C Male 32.8
Sample D Male 34.6
Dorsal hippocampus
nTPM: 63.3
Samples: 4

Max nTPM: 87.0
Min nTPM: 45.4
Sample A Female 87.0
Sample B Female 51.4
Sample C Male 69.5
Sample D Male 45.4
Entorhinal cortex
nTPM: 37.2
Samples: 4

Max nTPM: 39.9
Min nTPM: 34.7
Sample A Female 39.9
Sample B Female 36.0
Sample C Male 38.0
Sample D Male 34.7
Ventral hippocampus
nTPM: 52.4
Samples: 4

Max nTPM: 69.4
Min nTPM: 33.1
Sample A Female 54.5
Sample B Female 33.1
Sample C Male 52.4
Sample D Male 69.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 15.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.5
Samples: 4

Max nTPM: 15.9
Min nTPM: 13.0
Sample A Male 15.9
Sample B Male 13.7
Sample C Female 13.0
Sample D Female 15.2
Hippocampal formation
nTPM: 15.6
Samples: 4

Max nTPM: 18.1
Min nTPM: 13.4
Sample A Male 13.4
Sample B Male 16.8
Sample C Female 18.1
Sample D Female 14.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.9
74821568 Antisense, RP_060321_02_A02, Mouse strain C57BL/6J (56 days, male) 11.9

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