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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
123.8
nTPM
Monaco:
85.2
nTPM
Schmiedel:
55.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
123.8
HPA sample
nTPM
gdT-cell nTPM: 70.1
Samples: 6
Max nTPM: 87.7
Min nTPM: 53.3
P10809_1007
53.3
P10809_1022
78.9
P10809_1041
87.7
P10809_1060
65.0
P10809_1077
79.2
P10809_1098
56.3
MAIT T-cell nTPM: 80.6
Samples: 6
Max nTPM: 101.4
Min nTPM: 58.6
P10809_1006
59.7
P10809_1024
101.4
P10809_1043
83.1
P10809_1062
85.1
P10809_1083
58.6
P10809_1097
95.4
Memory CD4 T-cell nTPM: 74.1
Samples: 6
Max nTPM: 94.0
Min nTPM: 58.3
P10809_1014
58.3
P10809_1026
70.4
P10809_1045
94.0
P10809_1064
69.8
P10809_1086
76.4
P10809_1113
75.9
Memory CD8 T-cell nTPM: 82.6
Samples: 5
Max nTPM: 108.7
Min nTPM: 60.6
P10809_1012
60.6
P10809_1027
108.7
P10809_1046
82.3
P10809_1065
80.0
P10809_1111
81.4
Naive CD4 T-cell nTPM: 50.5
Samples: 6
Max nTPM: 69.4
Min nTPM: 38.0
P10809_1015
38.0
P10809_1030
50.5
P10809_1049
69.4
P10809_1068
46.7
P10809_1085
51.7
P10809_1112
46.7
Naive CD8 T-cell nTPM: 68.6
Samples: 6
Max nTPM: 81.1
Min nTPM: 43.4
P10809_1016
43.4
P10809_1031
77.0
P10809_1050
74.0
P10809_1069
81.1
P10809_1087
78.2
P10809_1110
57.7
T-reg nTPM: 123.8
Samples: 6
Max nTPM: 143.9
Min nTPM: 91.5
P10809_1018
91.5
P10809_1037
142.7
P10809_1056
97.4
P10809_1075
143.0
P10809_1094
143.9
P10809_1106
124.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
85.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 71.8
Samples: 4
Max nTPM: 83.6
Min nTPM: 58.1
RHH5202_R3573
80.1
RHH5230_R3602
65.3
RHH5259_R3631
58.1
RHH5288_R3660
83.6
Effector memory CD8 T-cell nTPM: 76.7
Samples: 4
Max nTPM: 97.4
Min nTPM: 54.1
RHH5203_R3574
97.4
RHH5231_R3603
86.6
RHH5260_R3632
54.1
RHH5289_R3661
68.5
MAIT T-cell nTPM: 80.7
Samples: 4
Max nTPM: 94.4
Min nTPM: 66.2
RHH5233_R3605
68.2
RHH5205_R3576
66.2
RHH5262_R3634
94.0
RHH5297_R3663
94.4
Memory CD4 T-cell TFH nTPM: 82.4
Samples: 4
Max nTPM: 90.3
Min nTPM: 74.2
RHH5300_R3666
74.2
RHH5236_R3608
90.3
RHH5265_R3637
86.2
RHH5208_R3579
78.9
Memory CD4 T-cell Th1 nTPM: 82.2
Samples: 4
Max nTPM: 110.0
Min nTPM: 61.2
RHH5210_R3581
61.2
RHH5302_R3668
110.0
RHH5238_R3610
87.5
RHH5267_R3639
70.0
Memory CD4 T-cell Th1/Th17 nTPM: 82.5
Samples: 4
Max nTPM: 112.4
Min nTPM: 46.9
RHH5303_R3669
111.0
RHH5211_R3582
112.4
RHH5239_R3611
46.9
RHH5268_R3640
59.8
Memory CD4 T-cell Th17 nTPM: 78.2
Samples: 4
Max nTPM: 111.6
Min nTPM: 60.1
RHH5304_R3670
62.3
RHH5212_R3583
111.6
RHH5240_R3612
60.1
RHH5269_R3641
78.9
Memory CD4 T-cell Th2 nTPM: 74.8
Samples: 4
Max nTPM: 95.6
Min nTPM: 51.3
RHH5305_R3671
74.0
RHH5213_R3584
78.4
RHH5241_R3613
95.6
RHH5270_R3642
51.3
Naive CD4 T-cell nTPM: 63.9
Samples: 4
Max nTPM: 71.9
Min nTPM: 56.0
RHH5306_R3672
71.9
RHH5214_R3585
64.1
RHH5242_R3614
56.0
RHH5271_R3643
63.4
Naive CD8 T-cell nTPM: 66.7
Samples: 4
Max nTPM: 92.2
Min nTPM: 44.9
RHH5201_R3572
92.2
RHH5229_R3601
44.9
RHH5258_R3630
78.5
RHH5287_R3659
51.0
Non-Vd2 gdTCR nTPM: 78.6
Samples: 4
Max nTPM: 101.9
Min nTPM: 54.5
RHH5235_R3607
54.5
RHH5264_R3636
84.1
RHH5207_R3578
74.0
RHH5299_R3665
101.9
T-reg nTPM: 82.0
Samples: 4
Max nTPM: 101.4
Min nTPM: 56.2
RHH5301_R3667
101.4
RHH5237_R3609
100.8
RHH5266_R3638
56.2
RHH5209_R3580
69.4
Terminal effector memory CD4 T-cell nTPM: 71.4
Samples: 2
Max nTPM: 86.8
Min nTPM: 56.0
RHH5243_R3615
56.0
RHH5272_R3644
86.8
Terminal effector memory CD8 T-cell nTPM: 85.3
Samples: 4
Max nTPM: 124.5
Min nTPM: 53.3
RHH5232_R3604
69.1
RHH5204_R3575
124.5
RHH5261_R3633
53.3
RHH5296_R3662
94.1
Vd2 gdTCR nTPM: 77.5
Samples: 4
Max nTPM: 108.3
Min nTPM: 55.7
RHH5234_R3606
55.7
RHH5206_R3577
108.3
RHH5263_R3635
63.1
RHH5298_R3664
82.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
