HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:6.0 nTPM
HPA Brain:11.1 nTPM
GTEx:6.0 nTPM
FANTOM5:17.4 Scaled Tags Per Million
Pig:10.6 nTPM
Mouse:17.6 nTPM
Allen mouse:4.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA012716
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 11.1
Sample id Sample description nTPM
Hippocampus
nTPM: 9.8
2148 Female, age 91, left hemisphere 10.9
1855 Male, age 76, left hemisphere 10.8
2621 Female, age 67, right hemisphere 9.8
1911 Female, age 85, right hemisphere 9.5
1898 Male, age 80, left hemisphere 9.2
2529 Female, age 94, left hemisphere 8.7
Dentate gyrus
nTPM: 10.6
2531 Female, age 67, both hemispheres 12.4
2246 Female, age 85, both hemispheres 11.5
2010 Male, age 76, both hemispheres 11.3
2528 Male, age 74, both hemispheres 9.9
2530 Female, age 94, left hemisphere 9.4
1927 Female, age 91, both hemispheres 9.3
Entorhinal gyrus
nTPM: 10.0
2613 Female, age 94, left hemisphere 10.6
2686 Male, age 75, right hemisphere 10.5
2764 Male, age 80, right hemisphere 10.5
1787 Male, age 76, left hemisphere 9.7
1938 Female, age 85, left hemisphere 9.7
2117 Female, age 91, right hemisphere 9.2
Hippocampus, CA1
nTPM: 11.0
2045 Male, age 76, both hemispheres 13.5
2527 Male, age 74, both hemispheres 10.8
2749 Male, age 80, left hemisphere 10.7
2082 Female, age 91, right hemisphere 10.3
1873 Female, age 85, both hemispheres 9.7
Hippocampus, CA2
nTPM: 10.4
1940 Female, age 85, left hemisphere 11.2
2249 Male, age 74, both hemispheres 11.1
1963 Male, age 80, left hemisphere 10.5
2113 Female, age 91, right hemisphere 10.4
1892 Male, age 76, both hemispheres 10.1
2437 Female, age 94, left hemisphere 9.0
Hippocampus, CA3
nTPM: 11.1
2620 Female, age 94, left hemisphere 13.4
2861 Female, age 67, both hemispheres 11.6
2436 Male, age 74, both hemispheres 10.9
1867 Male, age 76, both hemispheres 10.8
1891 Female, age 85, both hemispheres 10.0
2137 Male, age 80, left hemisphere 10.0
Parahippocampal cortex
nTPM: 10.0
2018 Male, age 76, both hemispheres 12.2
2250 Female, age 67, right hemisphere 10.5
2693 Female, age 94, both hemispheres 10.1
2532 Female, age 72, left hemisphere 10.0
2622 Female, age 67, right hemisphere 10.0
1933 Female, age 85, both hemispheres 9.8
1990 Female, age 91, right hemisphere 9.7
2245 Female, age 91, both hemispheres 9.6
1850 Male, age 80, both hemispheres 8.8
2692 Male, age 74, both hemispheres 8.8
Perirhinal gyrus
nTPM: 10.2
2521 Female, age 94, right hemisphere 10.6
2848 Male, age 76, right hemisphere 10.6
1794 Male, age 80, right hemisphere 10.3
1841 Female, age 85, right hemisphere 10.0
1847 Female, age 91, left hemisphere 9.8
Subiculum
nTPM: 10.0
1901 Male, age 80, both hemispheres 10.9
1977 Female, age 85, both hemispheres 10.7
2729 Female, age 91, right hemisphere 10.5
2619 Male, age 74, both hemispheres 9.5
2042 Male, age 76, both hemispheres 9.3
2438 Female, age 94, left hemisphere 8.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 6.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 6.0
Samples: 197

Max nTPM: 11.5
Min nTPM: 2.7
Std nTPM: 1.3
Median nTPM: 5.9
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 11.5
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 9.3
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 9.3
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 9.0
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 8.8
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 8.7
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 8.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 8.6
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 8.5
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 8.5
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 8.3
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 17.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.4
FF:10169-103B7 60 years, female 19.7
FF:10153-102I9 76 years, female 15.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 10.6
Pig sample Sample description nTPM
Subiculum
nTPM: 9.5
Samples: 4

Max nTPM: 11.8
Min nTPM: 8.5
Sample A Female 11.8
Sample B Female 8.5
Sample C Male 9.0
Sample D Male 8.6
Dorsal hippocampus
nTPM: 10.4
Samples: 4

Max nTPM: 13.9
Min nTPM: 7.8
Sample A Female 13.9
Sample B Female 10.7
Sample C Male 9.0
Sample D Male 7.8
Entorhinal cortex
nTPM: 7.7
Samples: 4

Max nTPM: 8.8
Min nTPM: 6.2
Sample A Female 8.8
Sample B Female 6.2
Sample C Male 8.7
Sample D Male 7.1
Ventral hippocampus
nTPM: 10.6
Samples: 4

Max nTPM: 12.9
Min nTPM: 7.2
Sample A Female 9.6
Sample B Female 7.2
Sample C Male 12.9
Sample D Male 12.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 17.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.5
Samples: 4

Max nTPM: 16.0
Min nTPM: 15.1
Sample A Male 15.1
Sample B Male 16.0
Sample C Female 15.7
Sample D Female 15.2
Hippocampal formation
nTPM: 17.7
Samples: 4

Max nTPM: 19.5
Min nTPM: 16.1
Sample A Male 16.1
Sample B Male 18.2
Sample C Female 19.5
Sample D Female 16.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.4
71656073 Antisense, RP_050927_03_F02, Mouse strain C57BL/6J (56 days, male) 4.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org