We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
206.2
nTPM
Monaco:
166.0
nTPM
Schmiedel:
117.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
206.2
HPA sample
nTPM
gdT-cell nTPM: 110.8
Samples: 6
Max nTPM: 137.3
Min nTPM: 70.1
P10809_1007
70.1
P10809_1022
137.3
P10809_1041
128.1
P10809_1060
94.2
P10809_1077
117.6
P10809_1098
117.3
MAIT T-cell nTPM: 143.0
Samples: 6
Max nTPM: 187.2
Min nTPM: 90.5
P10809_1006
90.5
P10809_1024
185.6
P10809_1043
124.0
P10809_1062
137.1
P10809_1083
133.5
P10809_1097
187.2
Memory CD4 T-cell nTPM: 146.0
Samples: 6
Max nTPM: 162.9
Min nTPM: 94.8
P10809_1014
94.8
P10809_1026
153.3
P10809_1045
162.9
P10809_1064
149.1
P10809_1086
155.7
P10809_1113
160.0
Memory CD8 T-cell nTPM: 134.7
Samples: 5
Max nTPM: 171.3
Min nTPM: 99.4
P10809_1012
99.4
P10809_1027
171.3
P10809_1046
134.8
P10809_1065
116.3
P10809_1111
151.5
Naive CD4 T-cell nTPM: 150.0
Samples: 6
Max nTPM: 189.6
Min nTPM: 103.1
P10809_1015
103.1
P10809_1030
153.0
P10809_1049
189.6
P10809_1068
143.5
P10809_1085
166.3
P10809_1112
144.4
Naive CD8 T-cell nTPM: 134.4
Samples: 6
Max nTPM: 147.5
Min nTPM: 98.3
P10809_1016
98.3
P10809_1031
135.8
P10809_1050
144.3
P10809_1069
147.5
P10809_1087
139.1
P10809_1110
141.4
T-reg nTPM: 206.3
Samples: 6
Max nTPM: 264.5
Min nTPM: 148.3
P10809_1018
148.3
P10809_1037
264.5
P10809_1056
185.4
P10809_1075
178.7
P10809_1094
240.0
P10809_1106
220.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
166.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 97.2
Samples: 4
Max nTPM: 134.6
Min nTPM: 68.8
RHH5202_R3573
134.6
RHH5230_R3602
68.8
RHH5259_R3631
75.9
RHH5288_R3660
109.6
Effector memory CD8 T-cell nTPM: 166.0
Samples: 4
Max nTPM: 234.4
Min nTPM: 131.3
RHH5203_R3574
234.4
RHH5231_R3603
162.9
RHH5260_R3632
135.2
RHH5289_R3661
131.3
MAIT T-cell nTPM: 100.3
Samples: 4
Max nTPM: 109.4
Min nTPM: 93.1
RHH5233_R3605
93.9
RHH5205_R3576
93.1
RHH5262_R3634
109.4
RHH5297_R3663
104.7
Memory CD4 T-cell TFH nTPM: 117.1
Samples: 4
Max nTPM: 141.7
Min nTPM: 103.9
RHH5300_R3666
103.9
RHH5236_R3608
110.9
RHH5265_R3637
111.8
RHH5208_R3579
141.7
Memory CD4 T-cell Th1 nTPM: 100.2
Samples: 4
Max nTPM: 127.3
Min nTPM: 81.1
RHH5210_R3581
81.1
RHH5302_R3668
127.3
RHH5238_R3610
82.3
RHH5267_R3639
110.0
Memory CD4 T-cell Th1/Th17 nTPM: 101.2
Samples: 4
Max nTPM: 124.5
Min nTPM: 56.7
RHH5303_R3669
124.5
RHH5211_R3582
123.6
RHH5239_R3611
56.7
RHH5268_R3640
100.0
Memory CD4 T-cell Th17 nTPM: 119.2
Samples: 4
Max nTPM: 124.5
Min nTPM: 112.1
RHH5304_R3670
112.1
RHH5212_R3583
121.1
RHH5240_R3612
119.0
RHH5269_R3641
124.5
Memory CD4 T-cell Th2 nTPM: 121.5
Samples: 4
Max nTPM: 127.5
Min nTPM: 116.9
RHH5305_R3671
116.9
RHH5213_R3584
120.3
RHH5241_R3613
121.3
RHH5270_R3642
127.5
Naive CD4 T-cell nTPM: 92.1
Samples: 4
Max nTPM: 122.8
Min nTPM: 69.9
RHH5306_R3672
93.3
RHH5214_R3585
82.2
RHH5242_R3614
69.9
RHH5271_R3643
122.8
Naive CD8 T-cell nTPM: 95.8
Samples: 4
Max nTPM: 131.2
Min nTPM: 37.1
RHH5201_R3572
131.2
RHH5229_R3601
37.1
RHH5258_R3630
83.9
RHH5287_R3659
131.1
Non-Vd2 gdTCR nTPM: 104.3
Samples: 4
Max nTPM: 123.5
Min nTPM: 77.7
RHH5235_R3607
101.3
RHH5264_R3636
123.5
RHH5207_R3578
114.5
RHH5299_R3665
77.7
T-reg nTPM: 136.8
Samples: 4
Max nTPM: 160.3
Min nTPM: 114.8
RHH5301_R3667
132.5
RHH5237_R3609
160.3
RHH5266_R3638
139.6
RHH5209_R3580
114.8
Terminal effector memory CD4 T-cell nTPM: 120.4
Samples: 2
Max nTPM: 123.3
Min nTPM: 117.4
RHH5243_R3615
123.3
RHH5272_R3644
117.4
Terminal effector memory CD8 T-cell nTPM: 105.6
Samples: 4
Max nTPM: 121.3
Min nTPM: 93.6
RHH5232_R3604
106.0
RHH5204_R3575
93.6
RHH5261_R3633
101.4
RHH5296_R3662
121.3
Vd2 gdTCR nTPM: 107.9
Samples: 4
Max nTPM: 132.3
Min nTPM: 85.2
RHH5234_R3606
100.6
RHH5206_R3577
132.3
RHH5263_R3635
113.6
RHH5298_R3664
85.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
