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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
128.8
nTPM
FANTOM5:
316.2
Scaled Tags Per Million
Pig:
160.3
nTPM
Allen mouse:
14.3
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
128.8
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 71.4
1984
Male, age 76, both hemispheres
85.2
2188
Female, age 91, both hemispheres
69.5
2090
Male, age 80, both hemispheres
69.1
2301
Female, age 85, both hemispheres
61.6
Dorsal cochlear nucleus nTPM: 83.9
2802
Male, age 74, right hemisphere
101.0
2058
Male, age 76, both hemispheres
85.0
2187
Female, age 91, both hemispheres
81.4
2378
Male, age 80, both hemispheres
79.6
2370
Male, age 61, both hemispheres
72.4
Dorsal tegmental nucleus nTPM: 83.4
2083
Male, age 80, both hemispheres
100.0
1936
Male, age 76, left hemisphere
88.3
2326
Male, age 74, both hemispheres
84.4
2358
Male, age 61, both hemispheres
61.0
Dorsolateral tegmental area nTPM: 86.9
2751
Female, age 85, both hemispheres
107.9
2654
Male, age 80, both hemispheres
103.3
2360
Male, age 74, both hemispheres
93.5
2141
Male, age 76, both hemispheres
81.4
2337
Male, age 61, both hemispheres
48.4
Kolliker-Fuse nucleus nTPM: 89.7
2163
Male, age 80, both hemispheres
115.4
2315
Male, age 76, right hemisphere
89.3
2793
Female, age 91, left hemisphere
64.5
Lateral lemniscal nuclei nTPM: 99.7
2169
Male, age 76, both hemispheres
131.2
2036
Male, age 80, both hemispheres
118.1
2746
Female, age 85, left hemisphere
98.7
2453
Male, age 74, right hemisphere
90.4
2320
Female, age 91, left hemisphere
60.2
Lateral parabrachial nucleus nTPM: 85.1
2139
Female, age 85, right hemisphere
116.8
2013
Male, age 80, both hemispheres
89.5
2790
Male, age 61, both hemispheres
68.7
2792
Male, age 76, both hemispheres
65.5
Lateral vestibular nucleus nTPM: 87.9
2184
Male, age 76, both hemispheres
104.2
2311
Male, age 80, both hemispheres
71.7
Locus coeruleus nTPM: 127.8
2123
Female, age 91, both hemispheres
163.0
2014
Male, age 55, unknown
144.4
2788
Male, age 74, unknown
133.4
2720
Male, age 74, both hemispheres
128.2
2317
Female, age 72, unknown
117.0
1980
Male, age 76, both hemispheres
108.8
2162
Male, age 80, both hemispheres
99.6
Medial parabrachial nucleus nTPM: 86.9
2170
Female, age 91, both hemispheres
99.4
2854
Male, age 80, both hemispheres
96.6
2786
Male, age 76, both hemispheres
85.5
2463
Female, age 85, right hemisphere
83.1
2156
Male, age 61, both hemispheres
69.8
Medial periolivary nuclei nTPM: 101.7
2171
Female, age 85, both hemispheres
143.7
2063
Male, age 76, both hemispheres
138.3
2791
Male, age 74, right hemisphere
104.7
2081
Male, age 80, both hemispheres
66.9
2458
Female, age 91, both hemispheres
54.8
Motor facial nucleus nTPM: 96.5
2062
Male, age 76, both hemispheres
150.6
2365
Male, age 74, right hemisphere
99.5
2697
Female, age 85, both hemispheres
88.4
2126
Male, age 61, both hemispheres
85.5
2795
Female, age 91, both hemispheres
80.8
2327
Male, age 80, both hemispheres
74.1
Motor trigeminal nucleus nTPM: 76.5
2079
Male, age 80, both hemispheres
92.7
2309
Male, age 76, both hemispheres
85.3
2560
Male, age 74, both hemispheres
76.4
2335
Male, age 61, both hemispheres
71.3
2321
Female, age 91, both hemispheres
56.7
Nuclei of the trapezoid body nTPM: 121.2
2159
Male, age 61, both hemispheres
180.6
2735
Female, age 85, both hemispheres
139.6
1983
Male, age 76, both hemispheres
137.0
2166
Male, age 80, both hemispheres
82.1
2368
Female, age 91, both hemispheres
66.4
Nucleus raphe magnus nTPM: 117.9
2160
Male, age 61, both hemispheres
213.9
2172
Female, age 85, both hemispheres
130.8
2455
Male, age 74, both hemispheres
116.2
2051
Male, age 76, both hemispheres
103.0
2328
Male, age 80, both hemispheres
79.8
2459
Female, age 91, both hemispheres
63.9
Paramedian reticular nucleus nTPM: 123.0
2050
Female, age 85, both hemispheres
152.6
2057
Male, age 80, both hemispheres
120.6
2313
Male, age 61, both hemispheres
115.2
2052
Male, age 76, both hemispheres
103.8
Pedunculopontine tegmental nucleus nTPM: 93.6
1921
Female, age 85, both hemispheres
107.8
2334
Male, age 80, both hemispheres
95.8
2338
Male, age 61, both hemispheres
77.1
Pontine nuclei nTPM: 128.8
2727
Male, age 61, right hemisphere
218.0
1863
Male, age 55, unknown
177.5
2787
Female, age 85, both hemispheres
145.9
2109
Female, age 72, unknown
141.2
1968
Male, age 76, left hemisphere
117.7
2454
Male, age 74, left hemisphere
92.3
2115
Male, age 80, left hemisphere
69.1
2319
Female, age 91, both hemispheres
68.6
Pontine raphe nucleus nTPM: 112.8
2122
Female, age 85, midline
132.4
2853
Male, age 76, midline
93.3
Posteroventral cochlear nucleus nTPM: 82.7
2752
Female, age 85, both hemispheres
120.4
2070
Male, age 76, both hemispheres
93.4
2371
Male, age 61, both hemispheres
74.1
2341
Male, age 80, both hemispheres
71.5
2135
Female, age 91, both hemispheres
54.1
Principal sensory trigeminal nucleus nTPM: 110.1
2158
Male, age 61, both hemispheres
168.2
2008
Male, age 80, left hemisphere
119.6
2324
Male, age 76, both hemispheres
90.0
2367
Female, age 91, left hemisphere
62.6
Reticular pontine nucleus, caudal nTPM: 83.9
2092
Male, age 76, both hemispheres
111.3
2332
Male, age 80, right hemisphere
83.3
2559
Male, age 74, both hemispheres
76.1
2457
Female, age 91, both hemispheres
65.2
Reticular pontine nucleus, oral nTPM: 99.1
2012
Female, age 85, both hemispheres
123.6
1939
Male, age 80, both hemispheres
116.8
2361
Male, age 74, both hemispheres
103.7
2167
Male, age 76, both hemispheres
91.7
2366
Female, age 91, both hemispheres
59.9
Reticulotegmental nucleus nTPM: 88.9
2325
Male, age 76, both hemispheres
110.0
2452
Male, age 74, both hemispheres
85.7
2333
Male, age 80, both hemispheres
83.7
2322
Female, age 91, both hemispheres
76.1
Spinal trigeminal nucleus, oral nTPM: 95.5
2737
Female, age 85, both hemispheres
114.2
2164
Male, age 80, both hemispheres
93.1
1978
Male, age 76, both hemispheres
79.3
Subcoeruleus area nTPM: 96.7
1958
Male, age 80, both hemispheres
112.5
2323
Female, age 91, left hemisphere
103.3
2369
Female, age 85, left hemisphere
91.5
2451
Male, age 74, both hemispheres
88.4
2089
Male, age 76, left hemisphere
87.6
Superior olive nTPM: 97.7
1875
Female, age 85, both hemispheres
146.3
2364
Male, age 74, right hemisphere
104.9
2020
Male, age 76, both hemispheres
103.1
2329
Male, age 80, right hemisphere
72.8
2561
Female, age 91, both hemispheres
61.5
Ventral periolivary nuclei nTPM: 97.6
2130
Female, age 85, both hemispheres
113.2
2165
Male, age 80, both hemispheres
107.0
2023
Male, age 76, both hemispheres
101.8
2794
Female, age 91, left hemisphere
68.4
Ventrolateral tegmental area, A5 NE cell group nTPM: 89.4
2840
Female, age 85, both hemispheres
111.7
2449
Male, age 74, both hemispheres
103.3
1959
Male, age 76, both hemispheres
100.4
2161
Male, age 80, both hemispheres
81.8
2359
Male, age 61, both hemispheres
80.2
2456
Female, age 91, both hemispheres
59.1
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
160.3
Pig sample
Sample description
nTPM
Pons nTPM: 160.3
Samples: 4
Max nTPM: 186.4
Min nTPM: 131.9
Sample A
Female
143.4
Sample B
Female
131.9
Sample C
Male
179.5
Sample D
Male
186.4
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
