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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
14.3
nTPM
Monaco:
15.6
nTPM
Schmiedel:
16.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
14.3
HPA sample
nTPM
gdT-cell nTPM: 10.1
Samples: 6
Max nTPM: 13.4
Min nTPM: 5.4
P10809_1007
5.7
P10809_1022
12.6
P10809_1041
13.4
P10809_1060
11.7
P10809_1077
11.8
P10809_1098
5.4
MAIT T-cell nTPM: 11.9
Samples: 6
Max nTPM: 18.3
Min nTPM: 8.2
P10809_1006
8.8
P10809_1024
18.3
P10809_1043
11.6
P10809_1062
12.8
P10809_1083
11.9
P10809_1097
8.2
Memory CD4 T-cell nTPM: 11.5
Samples: 6
Max nTPM: 17.6
Min nTPM: 8.6
P10809_1014
8.6
P10809_1026
11.5
P10809_1045
17.6
P10809_1064
11.3
P10809_1086
9.8
P10809_1113
10.4
Memory CD8 T-cell nTPM: 11.2
Samples: 5
Max nTPM: 14.2
Min nTPM: 7.8
P10809_1012
7.8
P10809_1027
14.0
P10809_1046
14.2
P10809_1065
10.5
P10809_1111
9.3
Naive CD4 T-cell nTPM: 7.6
Samples: 6
Max nTPM: 11.9
Min nTPM: 4.0
P10809_1015
5.4
P10809_1030
6.4
P10809_1049
11.7
P10809_1068
6.4
P10809_1085
11.9
P10809_1112
4.0
Naive CD8 T-cell nTPM: 7.7
Samples: 6
Max nTPM: 11.1
Min nTPM: 4.3
P10809_1016
6.0
P10809_1031
7.6
P10809_1050
10.0
P10809_1069
11.1
P10809_1087
7.4
P10809_1110
4.3
T-reg nTPM: 14.3
Samples: 6
Max nTPM: 17.0
Min nTPM: 10.5
P10809_1018
10.5
P10809_1037
14.7
P10809_1056
14.3
P10809_1075
14.6
P10809_1094
17.0
P10809_1106
14.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
15.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 12.8
Samples: 4
Max nTPM: 14.9
Min nTPM: 11.6
RHH5202_R3573
12.7
RHH5230_R3602
11.9
RHH5259_R3631
14.9
RHH5288_R3660
11.6
Effector memory CD8 T-cell nTPM: 12.1
Samples: 4
Max nTPM: 16.1
Min nTPM: 6.4
RHH5203_R3574
14.6
RHH5231_R3603
6.4
RHH5260_R3632
16.1
RHH5289_R3661
11.1
MAIT T-cell nTPM: 10.4
Samples: 4
Max nTPM: 11.7
Min nTPM: 9.5
RHH5233_R3605
9.6
RHH5205_R3576
11.7
RHH5262_R3634
9.5
RHH5297_R3663
10.6
Memory CD4 T-cell TFH nTPM: 12.7
Samples: 4
Max nTPM: 15.6
Min nTPM: 10.9
RHH5300_R3666
10.9
RHH5236_R3608
15.6
RHH5265_R3637
12.3
RHH5208_R3579
12.1
Memory CD4 T-cell Th1 nTPM: 7.7
Samples: 4
Max nTPM: 11.2
Min nTPM: 4.8
RHH5210_R3581
5.7
RHH5302_R3668
9.0
RHH5238_R3610
4.8
RHH5267_R3639
11.2
Memory CD4 T-cell Th1/Th17 nTPM: 12.9
Samples: 4
Max nTPM: 17.4
Min nTPM: 6.5
RHH5303_R3669
17.4
RHH5211_R3582
15.3
RHH5239_R3611
12.4
RHH5268_R3640
6.5
Memory CD4 T-cell Th17 nTPM: 8.6
Samples: 4
Max nTPM: 11.0
Min nTPM: 6.1
RHH5304_R3670
7.9
RHH5212_R3583
11.0
RHH5240_R3612
6.1
RHH5269_R3641
9.2
Memory CD4 T-cell Th2 nTPM: 10.8
Samples: 4
Max nTPM: 14.4
Min nTPM: 7.5
RHH5305_R3671
7.5
RHH5213_R3584
14.4
RHH5241_R3613
13.1
RHH5270_R3642
8.0
Naive CD4 T-cell nTPM: 8.8
Samples: 4
Max nTPM: 11.0
Min nTPM: 6.9
RHH5306_R3672
7.5
RHH5214_R3585
11.0
RHH5242_R3614
9.7
RHH5271_R3643
6.9
Naive CD8 T-cell nTPM: 8.6
Samples: 4
Max nTPM: 13.2
Min nTPM: 5.1
RHH5201_R3572
13.2
RHH5229_R3601
7.1
RHH5258_R3630
5.1
RHH5287_R3659
9.0
Non-Vd2 gdTCR nTPM: 11.2
Samples: 4
Max nTPM: 15.3
Min nTPM: 8.2
RHH5235_R3607
8.2
RHH5264_R3636
11.1
RHH5207_R3578
15.3
RHH5299_R3665
10.0
T-reg nTPM: 12.7
Samples: 4
Max nTPM: 14.8
Min nTPM: 11.6
RHH5301_R3667
11.6
RHH5237_R3609
14.8
RHH5266_R3638
12.7
RHH5209_R3580
11.7
Terminal effector memory CD4 T-cell nTPM: 15.6
Samples: 2
Max nTPM: 22.9
Min nTPM: 8.3
RHH5243_R3615
8.3
RHH5272_R3644
22.9
Terminal effector memory CD8 T-cell nTPM: 9.5
Samples: 4
Max nTPM: 12.5
Min nTPM: 7.9
RHH5232_R3604
9.0
RHH5204_R3575
12.5
RHH5261_R3633
7.9
RHH5296_R3662
8.7
Vd2 gdTCR nTPM: 8.1
Samples: 4
Max nTPM: 15.7
Min nTPM: 4.1
RHH5234_R3606
4.1
RHH5206_R3577
15.7
RHH5263_R3635
4.1
RHH5298_R3664
8.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
