HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:31.0 nTPM
HPA Brain:51.3 nTPM
GTEx:31.0 nTPM
FANTOM5:27.7 Scaled Tags Per Million
Pig:38.2 nTPM
Mouse:114.2 nTPM
Allen mouse:11.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA017894
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 51.3
Sample id Sample description nTPM
Hippocampus
nTPM: 46.0
2148 Female, age 91, left hemisphere 56.2
1898 Male, age 80, left hemisphere 50.2
1855 Male, age 76, left hemisphere 47.9
2621 Female, age 67, right hemisphere 43.5
1911 Female, age 85, right hemisphere 40.9
2529 Female, age 94, left hemisphere 37.4
Dentate gyrus
nTPM: 49.4
2531 Female, age 67, both hemispheres 64.5
2528 Male, age 74, both hemispheres 53.4
1927 Female, age 91, both hemispheres 49.6
2010 Male, age 76, both hemispheres 44.9
2246 Female, age 85, both hemispheres 43.2
2530 Female, age 94, left hemisphere 41.1
Entorhinal gyrus
nTPM: 51.1
2613 Female, age 94, left hemisphere 67.6
2764 Male, age 80, right hemisphere 52.5
1787 Male, age 76, left hemisphere 51.9
1938 Female, age 85, left hemisphere 51.3
2686 Male, age 75, right hemisphere 47.9
2117 Female, age 91, right hemisphere 35.4
Hippocampus, CA1
nTPM: 50.1
2045 Male, age 76, both hemispheres 59.0
2749 Male, age 80, left hemisphere 59.0
1873 Female, age 85, both hemispheres 51.4
2527 Male, age 74, both hemispheres 43.8
2082 Female, age 91, right hemisphere 37.1
Hippocampus, CA2
nTPM: 43.1
1892 Male, age 76, both hemispheres 50.8
1940 Female, age 85, left hemisphere 50.3
1963 Male, age 80, left hemisphere 44.4
2113 Female, age 91, right hemisphere 37.9
2437 Female, age 94, left hemisphere 37.8
2249 Male, age 74, both hemispheres 37.4
Hippocampus, CA3
nTPM: 51.3
2620 Female, age 94, left hemisphere 77.7
2861 Female, age 67, both hemispheres 61.4
2137 Male, age 80, left hemisphere 50.4
1867 Male, age 76, both hemispheres 45.0
1891 Female, age 85, both hemispheres 39.9
2436 Male, age 74, both hemispheres 33.5
Parahippocampal cortex
nTPM: 43.9
2622 Female, age 67, right hemisphere 51.6
1850 Male, age 80, both hemispheres 49.4
1933 Female, age 85, both hemispheres 49.1
2532 Female, age 72, left hemisphere 44.4
2693 Female, age 94, both hemispheres 43.3
1990 Female, age 91, right hemisphere 41.5
2018 Male, age 76, both hemispheres 41.3
2692 Male, age 74, both hemispheres 39.7
2245 Female, age 91, both hemispheres 39.3
2250 Female, age 67, right hemisphere 39.1
Perirhinal gyrus
nTPM: 49.6
1794 Male, age 80, right hemisphere 58.4
2521 Female, age 94, right hemisphere 50.9
1841 Female, age 85, right hemisphere 50.4
1847 Female, age 91, left hemisphere 50.1
2848 Male, age 76, right hemisphere 38.3
Subiculum
nTPM: 38.2
2729 Female, age 91, right hemisphere 47.2
1977 Female, age 85, both hemispheres 45.0
2619 Male, age 74, both hemispheres 42.7
1901 Male, age 80, both hemispheres 36.5
2438 Female, age 94, left hemisphere 29.7
2042 Male, age 76, both hemispheres 28.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 31.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 31.0
Samples: 197

Max nTPM: 66.8
Min nTPM: 6.4
Std nTPM: 13.5
Median nTPM: 29.4
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 66.8
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 65.8
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 64.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 61.8
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 61.5
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 59.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 59.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 58.9
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 58.7
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 58.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 57.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 27.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 27.7
FF:10169-103B7 60 years, female 30.1
FF:10153-102I9 76 years, female 25.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 38.2
Pig sample Sample description nTPM
Subiculum
nTPM: 21.5
Samples: 4

Max nTPM: 27.3
Min nTPM: 15.8
Sample A Female 27.3
Sample B Female 21.7
Sample C Male 15.8
Sample D Male 21.2
Dorsal hippocampus
nTPM: 12.1
Samples: 4

Max nTPM: 13.9
Min nTPM: 8.8
Sample A Female 12.3
Sample B Female 13.4
Sample C Male 8.8
Sample D Male 13.9
Entorhinal cortex
nTPM: 38.3
Samples: 4

Max nTPM: 41.9
Min nTPM: 31.8
Sample A Female 41.9
Sample B Female 39.9
Sample C Male 39.4
Sample D Male 31.8
Ventral hippocampus
nTPM: 12.3
Samples: 4

Max nTPM: 16.1
Min nTPM: 9.5
Sample A Female 11.6
Sample B Female 11.8
Sample C Male 16.1
Sample D Male 9.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 114.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 114.2
Samples: 4

Max nTPM: 129.2
Min nTPM: 91.2
Sample A Male 120.7
Sample B Male 129.2
Sample C Female 91.2
Sample D Female 115.6
Hippocampal formation
nTPM: 63.7
Samples: 4

Max nTPM: 71.6
Min nTPM: 58.7
Sample A Male 71.6
Sample B Male 64.5
Sample C Female 58.7
Sample D Female 60.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.9
67881761 Antisense, RP_040920_02_F09, Mouse strain C57BL/6J (56 days, male) 14.2
70744516 Antisense, RP_050725_02_B09, Mouse strain C57BL/6J (56 days, male) 9.6

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