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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
6.5
nTPM
HPA Brain:
23.1
nTPM
GTEx:
6.5
nTPM
FANTOM5:
12.1
Scaled Tags Per Million
Pig:
49.8
nTPM
Mouse:
24.2
nTPM
Allen mouse:
1.1
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
23.1
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 18.2
2666
Male, age 74, left hemisphere
28.4
2828
Female, age 72, unknown
21.2
2019
Male, age 18, unknown
20.2
1870
Female, age 42, unknown
17.7
1827
Male, age 72, unknown
17.0
2586
Male, age 75, left hemisphere
16.3
1830
Male, age 51, unknown
16.1
1833
Male, age 53, unknown
15.3
2219
Male, age 76, both hemispheres
15.2
2411
Female, age 72, unknown
14.5
Dorsal raphe nucleus nTPM: 15.0
2047
Male, age 72, unknown
19.9
2750
Male, age 76, both hemispheres
14.8
1828
Male, age 53, unknown
14.0
2016
Female, age 72, unknown
13.8
2298
Female, age 72, unknown
12.5
Inferior colliculus nTPM: 19.1
1890
Male, age 53, unknown
23.4
2097
Female, age 72, unknown
22.3
1848
Female, age 42, unknown
16.4
2849
Male, age 72, unknown
14.1
Median raphe nucleus nTPM: 14.3
2220
Male, age 76, midline
14.3
Periaquaductal grey, anterior nTPM: 21.6
1947
Male, age 18, unknown
24.6
2502
Female, age 75, unknown
20.5
1795
Male, age 51, unknown
19.8
Periaquaductal grey, dorsal nTPM: 12.6
2464
Female, age 72, unknown
15.1
1831
Male, age 72, unknown
14.5
2850
Male, age 76, both hemispheres
11.0
1840
Male, age 53, unknown
9.6
Periaquaductal grey, lateral nTPM: 12.7
2053
Male, age 18, unknown
14.7
2272
Male, age 74, both hemispheres
12.9
2140
Male, age 76, both hemispheres
10.6
Pretectal area nTPM: 15.4
1817
Female, age 42, unknown
21.8
2007
Male, age 72, unknown
21.2
1816
Male, age 51, unknown
17.1
1815
Male, age 53, unknown
16.3
2825
Male, age 18, unknown
15.4
2667
Female, age 75, unknown
15.0
2407
Male, age 75, both hemispheres
14.0
1944
Female, age 72, unknown
13.5
2224
Female, age 72, unknown
12.0
2316
Male, age 76, right hemisphere
11.9
2273
Male, age 74, both hemispheres
11.2
Red nucleus nTPM: 23.1
1954
Female, age 42, unknown
30.2
2588
Male, age 74, left hemisphere
28.8
1821
Female, age 72, unknown
25.0
2769
Male, age 72, unknown
24.4
2227
Male, age 72, unknown
24.2
1904
Male, age 53, unknown
24.0
1865
Male, age 51, unknown
23.5
2503
Female, age 72, unknown
22.4
2584
Male, age 75, left hemisphere
19.7
2823
Male, age 76, right hemisphere
19.2
2785
Male, age 18, unknown
18.4
2725
Female, age 75, unknown
17.5
Substantia nigra nTPM: 18.2
2665
Male, age 74, both hemispheres
35.0
1941
Male, age 53, unknown
22.4
1889
Female, age 72, unknown
17.5
2590
Female, age 75, unknown
17.3
1851
Male, age 51, unknown
16.6
2409
Female, age 72, unknown
16.4
1916
Female, age 42, unknown
15.9
2241
Male, age 72, unknown
13.7
2699
Male, age 18, unknown
13.6
2583
Male, age 75, right hemisphere
13.5
Superior colliculus nTPM: 15.4
2668
Female, age 75, unknown
21.0
2587
Male, age 74, left hemisphere
20.4
2087
Female, age 72, unknown
16.0
2664
Male, age 75, both hemispheres
15.9
1839
Male, age 51, unknown
15.8
2261
Male, age 18, unknown
15.6
1796
Male, age 53, unknown
14.3
1895
Male, age 76, right hemisphere
13.3
1913
Female, age 42, unknown
11.0
1995
Male, age 72, unknown
10.5
Ventral tegmental area nTPM: 15.0
2223
Female, age 72, unknown
17.8
2410
Female, age 72, unknown
16.5
1942
Male, age 51, unknown
15.3
1915
Female, age 42, unknown
13.9
2021
Male, age 53, unknown
13.5
2218
Male, age 76, both hemispheres
12.9
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
6.5
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 6.5
Samples: 139
Max nTPM: 23.4
Min nTPM: 2.0
Std nTPM: 3.2
Median nTPM: 6.0
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
23.4
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
18.1
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
15.8
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
15.6
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
13.6
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
13.2
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
11.9
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
11.6
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
11.6
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
11.5
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
11.4
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
11.4
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
11.1
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
11.0
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
10.9
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
10.8
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
10.5
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
10.0
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
9.9
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
9.9
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
9.8
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
9.1
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
8.7
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
8.5
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
8.5
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
8.4
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
8.2
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
8.2
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
8.0
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
8.0
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
7.9
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
7.9
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
7.9
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
7.9
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
7.8
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
7.7
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
7.7
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
7.5
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
7.5
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
7.3
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
7.2
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
7.1
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
7.0
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
7.0
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
6.9
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
6.8
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
6.7
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
6.6
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
6.6
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
6.6
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
6.5
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
6.5
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
6.5
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
6.5
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
6.4
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
6.4
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
6.4
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
6.3
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
6.3
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
6.3
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
6.3
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
6.3
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
6.3
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
6.2
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
6.2
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
6.2
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
6.1
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
6.1
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
6.0
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
6.0
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
6.0
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
6.0
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
6.0
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
5.9
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
5.8
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
5.8
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
5.8
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
5.7
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
5.7
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
5.6
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
5.5
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
5.5
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
5.4
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
5.3
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
5.3
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
5.3
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
5.2
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
5.1
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
5.1
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
5.0
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
5.0
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
4.9
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
4.9
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
4.9
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
4.9
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
4.9
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
4.8
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
4.6
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
4.6
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
4.6
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
4.5
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
4.5
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
4.5
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
4.5
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
4.4
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
4.3
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
4.3
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
4.3
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
4.1
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
4.1
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
4.1
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
4.1
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
4.1
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
4.0
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
4.0
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
4.0
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
4.0
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
3.9
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
3.9
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
3.9
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
3.7
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
3.6
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
3.5
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
3.5
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
3.4
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
3.4
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
3.0
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
2.8
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
2.8
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
2.7
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
2.7
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
2.6
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
2.6
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
2.5
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
2.4
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
2.3
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
2.2
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
2.0
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
2.0
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
24.2
Mouse sample
Sample description
nTPM
Midbrain nTPM: 24.2
Samples: 4
Max nTPM: 27.5
Min nTPM: 20.8
Sample A
Male
20.8
Sample B
Male
23.1
Sample C
Female
27.5
Sample D
Female
25.3
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.