We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
15.5
nTPM
Monaco:
27.3
nTPM
Schmiedel:
94.3
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
15.5
HPA sample
nTPM
gdT-cell nTPM: 8.1
Samples: 6
Max nTPM: 11.7
Min nTPM: 0.0
P10809_1007
5.9
P10809_1022
11.2
P10809_1041
0.0
P10809_1060
10.5
P10809_1077
9.3
P10809_1098
11.7
MAIT T-cell nTPM: 12.5
Samples: 6
Max nTPM: 21.2
Min nTPM: 9.6
P10809_1006
11.4
P10809_1024
9.8
P10809_1043
13.0
P10809_1062
9.8
P10809_1083
9.6
P10809_1097
21.2
Memory CD4 T-cell nTPM: 10.1
Samples: 6
Max nTPM: 16.0
Min nTPM: 6.9
P10809_1014
11.3
P10809_1026
8.5
P10809_1045
16.0
P10809_1064
6.9
P10809_1086
9.0
P10809_1113
8.7
Memory CD8 T-cell nTPM: 9.4
Samples: 5
Max nTPM: 11.9
Min nTPM: 6.6
P10809_1012
10.0
P10809_1027
7.8
P10809_1046
10.6
P10809_1065
6.6
P10809_1111
11.9
Naive CD4 T-cell nTPM: 10.4
Samples: 6
Max nTPM: 11.9
Min nTPM: 7.2
P10809_1015
7.2
P10809_1030
11.9
P10809_1049
11.7
P10809_1068
9.6
P10809_1085
11.8
P10809_1112
10.1
Naive CD8 T-cell nTPM: 9.4
Samples: 6
Max nTPM: 11.3
Min nTPM: 8.0
P10809_1016
8.7
P10809_1031
8.2
P10809_1050
11.3
P10809_1069
10.3
P10809_1087
8.0
P10809_1110
9.6
T-reg nTPM: 15.5
Samples: 6
Max nTPM: 19.9
Min nTPM: 10.2
P10809_1018
14.5
P10809_1037
18.7
P10809_1056
18.4
P10809_1075
10.2
P10809_1094
19.9
P10809_1106
11.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
27.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 13.4
Samples: 4
Max nTPM: 29.6
Min nTPM: 3.9
RHH5202_R3573
14.0
RHH5230_R3602
3.9
RHH5259_R3631
6.2
RHH5288_R3660
29.6
Effector memory CD8 T-cell nTPM: 12.1
Samples: 4
Max nTPM: 16.9
Min nTPM: 6.9
RHH5203_R3574
10.0
RHH5231_R3603
16.9
RHH5260_R3632
14.4
RHH5289_R3661
6.9
MAIT T-cell nTPM: 16.0
Samples: 4
Max nTPM: 18.3
Min nTPM: 12.1
RHH5233_R3605
16.9
RHH5205_R3576
12.1
RHH5262_R3634
18.3
RHH5297_R3663
16.6
Memory CD4 T-cell TFH nTPM: 19.1
Samples: 4
Max nTPM: 46.7
Min nTPM: 2.2
RHH5300_R3666
46.7
RHH5236_R3608
9.5
RHH5265_R3637
17.9
RHH5208_R3579
2.2
Memory CD4 T-cell Th1 nTPM: 18.5
Samples: 4
Max nTPM: 32.4
Min nTPM: 1.1
RHH5210_R3581
24.6
RHH5302_R3668
15.9
RHH5238_R3610
1.1
RHH5267_R3639
32.4
Memory CD4 T-cell Th1/Th17 nTPM: 27.3
Samples: 4
Max nTPM: 38.3
Min nTPM: 16.1
RHH5303_R3669
18.6
RHH5211_R3582
36.2
RHH5239_R3611
16.1
RHH5268_R3640
38.3
Memory CD4 T-cell Th17 nTPM: 23.5
Samples: 4
Max nTPM: 32.3
Min nTPM: 12.1
RHH5304_R3670
30.8
RHH5212_R3583
12.1
RHH5240_R3612
18.7
RHH5269_R3641
32.3
Memory CD4 T-cell Th2 nTPM: 22.0
Samples: 4
Max nTPM: 26.7
Min nTPM: 16.2
RHH5305_R3671
24.6
RHH5213_R3584
26.7
RHH5241_R3613
16.2
RHH5270_R3642
20.3
Naive CD4 T-cell nTPM: 18.6
Samples: 4
Max nTPM: 43.6
Min nTPM: 2.7
RHH5306_R3672
16.1
RHH5214_R3585
2.7
RHH5242_R3614
12.0
RHH5271_R3643
43.6
Naive CD8 T-cell nTPM: 9.6
Samples: 4
Max nTPM: 20.4
Min nTPM: 1.3
RHH5201_R3572
20.4
RHH5229_R3601
3.4
RHH5258_R3630
1.3
RHH5287_R3659
13.2
Non-Vd2 gdTCR nTPM: 11.7
Samples: 4
Max nTPM: 28.0
Min nTPM: 1.5
RHH5235_R3607
1.5
RHH5264_R3636
13.5
RHH5207_R3578
3.7
RHH5299_R3665
28.0
T-reg nTPM: 21.5
Samples: 4
Max nTPM: 38.5
Min nTPM: 10.8
RHH5301_R3667
38.5
RHH5237_R3609
10.8
RHH5266_R3638
14.9
RHH5209_R3580
21.9
Terminal effector memory CD4 T-cell nTPM: 8.8
Samples: 2
Max nTPM: 10.2
Min nTPM: 7.4
RHH5243_R3615
10.2
RHH5272_R3644
7.4
Terminal effector memory CD8 T-cell nTPM: 18.0
Samples: 4
Max nTPM: 37.1
Min nTPM: 9.7
RHH5232_R3604
10.2
RHH5204_R3575
9.7
RHH5261_R3633
15.1
RHH5296_R3662
37.1
Vd2 gdTCR nTPM: 12.7
Samples: 4
Max nTPM: 16.4
Min nTPM: 5.6
RHH5234_R3606
16.4
RHH5206_R3577
13.4
RHH5263_R3635
15.4
RHH5298_R3664
5.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
