PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:49.7 nTPM
FANTOM5:15.1 Scaled Tags Per Million
Pig:13.4 nTPM
Mouse:19.7 nTPM
Allen mouse:2.2 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 49.7
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 38.6
1984 Male, age 76, both hemispheres 42.7
2090 Male, age 80, both hemispheres 42.5
2301 Female, age 85, both hemispheres 34.7
2188 Female, age 91, both hemispheres 34.5
Area postrema
nTPM: 39.0
2306 Male, age 80, both hemispheres 43.7
2799 Male, age 61, both hemispheres 42.3
2054 Male, age 76, both hemispheres 31.0
Dorsal cochlear nucleus
nTPM: 44.8
2378 Male, age 80, both hemispheres 50.0
2802 Male, age 74, right hemisphere 48.6
2370 Male, age 61, both hemispheres 45.7
2058 Male, age 76, both hemispheres 44.4
2187 Female, age 91, both hemispheres 35.2
Dorsal medullary reticular nucleus
nTPM: 41.2
2088 Male, age 76, both hemispheres 42.6
2040 Female, age 85, both hemispheres 41.2
2373 Male, age 61, both hemispheres 39.9
Dorsal motor vagal complex
nTPM: 38.9
2797 Male, age 61, both hemispheres 45.7
2185 Male, age 76, both hemispheres 44.4
2844 Male, age 55, unknown 40.1
2133 Female, age 91, both hemispheres 39.1
2643 Male, age 74, both hemispheres 38.9
2000 Male, age 74, unknown 37.0
2807 Female, age 85, both hemispheres 36.2
2813 Female, age 72, unknown 29.7
Dorsal tegmental nucleus
nTPM: 36.9
2083 Male, age 80, both hemispheres 38.2
2358 Male, age 61, both hemispheres 37.8
2326 Male, age 74, both hemispheres 36.2
1936 Male, age 76, left hemisphere 35.5
Dorsolateral tegmental area
nTPM: 37.4
2337 Male, age 61, both hemispheres 40.5
2141 Male, age 76, both hemispheres 38.0
2654 Male, age 80, both hemispheres 37.6
2751 Female, age 85, both hemispheres 36.5
2360 Male, age 74, both hemispheres 34.7
Gigantocellular reticular nuclei, medullary
nTPM: 37.7
2310 Male, age 80, both hemispheres 42.3
2462 Male, age 74, both hemispheres 40.9
2387 Female, age 91, both hemispheres 38.3
1876 Female, age 85, both hemispheres 36.4
2022 Male, age 76, right hemisphere 34.3
2314 Male, age 61, both hemispheres 34.0
Gigantocellular reticular nuclei, pars
nTPM: 40.0
2084 Female, age 85, both hemispheres 44.3
2330 Male, age 80, both hemispheres 41.2
2706 Male, age 80, both hemispheres 40.7
2336 Male, age 61, both hemispheres 39.3
2168 Male, age 76, both hemispheres 34.4
Inferior olive
nTPM: 40.2
2379 Male, age 80, both hemispheres 44.2
2085 Female, age 85, both hemispheres 40.8
2178 Male, age 61, both hemispheres 40.1
2563 Male, age 74, both hemispheres 38.0
2628 Female, age 91, both hemispheres 37.7
Kolliker-Fuse nucleus
nTPM: 35.6
2163 Male, age 80, both hemispheres 40.3
2793 Female, age 91, left hemisphere 36.8
2315 Male, age 76, right hemisphere 29.8
Lateral lemniscal nuclei
nTPM: 36.8
2320 Female, age 91, left hemisphere 39.7
2453 Male, age 74, right hemisphere 38.2
2036 Male, age 80, both hemispheres 37.5
2746 Female, age 85, left hemisphere 36.5
2169 Male, age 76, both hemispheres 32.1
Lateral medullary reticular nucleus
nTPM: 35.3
2852 Male, age 80, both hemispheres 40.4
2804 Female, age 91, both hemispheres 39.0
2190 Female, age 85, both hemispheres 35.3
2374 Male, age 61, both hemispheres 35.2
2044 Male, age 76, both hemispheres 31.9
2305 Male, age 74, both hemispheres 29.9
Lateral parabrachial nucleus
nTPM: 35.5
2790 Male, age 61, both hemispheres 44.5
2139 Female, age 85, right hemisphere 35.7
2013 Male, age 80, both hemispheres 32.8
2792 Male, age 76, both hemispheres 29.2
Lateral vestibular nucleus
nTPM: 43.1
2184 Male, age 76, both hemispheres 45.3
2311 Male, age 80, both hemispheres 40.9
Locus coeruleus
nTPM: 40.8
1980 Male, age 76, both hemispheres 48.3
2317 Female, age 72, unknown 45.0
2123 Female, age 91, both hemispheres 44.4
2014 Male, age 55, unknown 40.0
2162 Male, age 80, both hemispheres 39.3
2720 Male, age 74, both hemispheres 37.8
2788 Male, age 74, unknown 31.4
Medial olivary nucleus
nTPM: 34.6
2138 Female, age 91, both hemispheres 43.9
1943 Male, age 61, both hemispheres 33.1
2851 Male, age 80, both hemispheres 32.7
1962 Male, age 76, both hemispheres 28.6
Medial parabrachial nucleus
nTPM: 38.1
2156 Male, age 61, both hemispheres 44.7
2463 Female, age 85, right hemisphere 44.2
2786 Male, age 76, both hemispheres 37.7
2170 Female, age 91, both hemispheres 32.9
2854 Male, age 80, both hemispheres 30.8
Medial periolivary nuclei
nTPM: 36.8
2458 Female, age 91, both hemispheres 40.0
2081 Male, age 80, both hemispheres 39.2
2171 Female, age 85, both hemispheres 38.2
2791 Male, age 74, right hemisphere 33.7
2063 Male, age 76, both hemispheres 33.1
Medial vestibular nucleus
nTPM: 40.5
2624 Male, age 61, both hemispheres 50.8
2093 Male, age 80, both hemispheres 44.1
2134 Male, age 76, both hemispheres 42.0
2743 Female, age 85, both hemispheres 35.4
2803 Female, age 91, both hemispheres 35.3
2801 Male, age 74, both hemispheres 35.2
Motor facial nucleus
nTPM: 38.5
2126 Male, age 61, both hemispheres 43.8
2795 Female, age 91, both hemispheres 41.6
2327 Male, age 80, both hemispheres 39.6
2062 Male, age 76, both hemispheres 38.4
2365 Male, age 74, right hemisphere 34.3
2697 Female, age 85, both hemispheres 33.4
Motor hypoglossal nucleus
nTPM: 38.4
2125 Female, age 91, both hemispheres 42.1
2182 Male, age 80, both hemispheres 41.3
2132 Female, age 85, both hemispheres 38.3
2461 Male, age 61, both hemispheres 37.3
2277 Male, age 76, both hemispheres 32.9
Motor trigeminal nucleus
nTPM: 39.4
2335 Male, age 61, both hemispheres 41.9
2560 Male, age 74, both hemispheres 41.7
2321 Female, age 91, both hemispheres 39.5
2079 Male, age 80, both hemispheres 38.4
2309 Male, age 76, both hemispheres 35.6
Nuclei of the trapezoid body
nTPM: 38.8
2368 Female, age 91, both hemispheres 42.8
2735 Female, age 85, both hemispheres 41.3
2166 Male, age 80, both hemispheres 38.0
2159 Male, age 61, both hemispheres 36.7
1983 Male, age 76, both hemispheres 35.0
Nucleus ambiguus
nTPM: 49.7
2096 Female, age 85, both hemispheres 67.6
2071 Male, age 76, both hemispheres 31.9
Nucleus cuneatus
nTPM: 44.3
2100 Male, age 76, both hemispheres 52.1
2805 Female, age 91, both hemispheres 50.3
2564 Male, age 74, both hemispheres 49.3
2131 Male, age 76, both hemispheres 45.6
2562 Male, age 61, both hemispheres 43.7
2376 Male, age 61, both hemispheres 43.5
2808 Female, age 85, both hemispheres 39.9
2381 Male, age 80, both hemispheres 37.3
2380 Male, age 80, both hemispheres 37.2
Nucleus gracilis
nTPM: 40.4
2299 Female, age 85, both hemispheres 46.6
2382 Male, age 80, both hemispheres 37.8
2627 Male, age 74, both hemispheres 36.7
Nucleus raphe magnus
nTPM: 37.1
2459 Female, age 91, both hemispheres 40.9
2172 Female, age 85, both hemispheres 37.8
2328 Male, age 80, both hemispheres 37.0
2455 Male, age 74, both hemispheres 36.4
2051 Male, age 76, both hemispheres 35.3
2160 Male, age 61, both hemispheres 34.9
Nucleus raphe obscurus
nTPM: 33.7
2800 Male, age 61, midline 35.5
2845 Female, age 85, midline 33.4
2142 Male, age 76, midline 32.3
Nucleus raphe pallidus
nTPM: 34.2
2183 Male, age 80, midline 38.5
1924 Male, age 61, midline 32.8
2145 Male, age 76, midline 31.2
Nucleus tractus solitarii
nTPM: 34.8
2307 Male, age 80, both hemispheres 41.9
2191 Female, age 85, both hemispheres 36.3
2656 Male, age 76, both hemispheres 33.9
2144 Female, age 91, right hemisphere 27.4
Paramedian reticular nucleus
nTPM: 35.4
2057 Male, age 80, both hemispheres 41.6
2313 Male, age 61, both hemispheres 41.3
2050 Female, age 85, both hemispheres 34.0
2052 Male, age 76, both hemispheres 24.5
Parvicellular reticular nuclei
nTPM: 39.9
2558 Male, age 74, both hemispheres 42.4
2119 Male, age 80, both hemispheres 40.7
2095 Male, age 76, both hemispheres 36.6
Parvicellular reticular nuclei, medullary
nTPM: 39.6
2091 Female, age 85, both hemispheres 43.4
2189 Female, age 91, both hemispheres 38.2
2181 Male, age 80, left hemisphere 37.1
Pedunculopontine tegmental nucleus
nTPM: 35.0
1921 Female, age 85, both hemispheres 37.3
2334 Male, age 80, both hemispheres 34.4
2338 Male, age 61, both hemispheres 33.4
Peritrigeminal nucleus
nTPM: 35.9
2067 Female, age 85, both hemispheres 38.8
2179 Male, age 61, both hemispheres 35.6
2136 Male, age 76, both hemispheres 33.4
Pontine nuclei
nTPM: 36.7
2115 Male, age 80, left hemisphere 41.9
2787 Female, age 85, both hemispheres 40.3
2319 Female, age 91, both hemispheres 37.6
2109 Female, age 72, unknown 37.4
1968 Male, age 76, left hemisphere 35.1
1863 Male, age 55, unknown 34.9
2727 Male, age 61, right hemisphere 34.6
2454 Male, age 74, left hemisphere 32.0
Pontine raphe nucleus
nTPM: 33.6
2122 Female, age 85, midline 35.1
2853 Male, age 76, midline 32.1
Posteroventral cochlear nucleus
nTPM: 38.7
2371 Male, age 61, both hemispheres 45.1
2341 Male, age 80, both hemispheres 40.5
2752 Female, age 85, both hemispheres 36.8
2135 Female, age 91, both hemispheres 36.6
2070 Male, age 76, both hemispheres 34.7
Prepositus hypoglossal nucleus
nTPM: 39.7
2086 Male, age 80, both hemispheres 40.8
2855 Female, age 85, right hemisphere 38.5
Principal sensory trigeminal nucleus
nTPM: 38.4
2324 Male, age 76, both hemispheres 42.9
2158 Male, age 61, both hemispheres 40.1
2367 Female, age 91, left hemisphere 35.6
2008 Male, age 80, left hemisphere 35.1
Reticular pontine nucleus, caudal
nTPM: 37.8
2332 Male, age 80, right hemisphere 41.9
2559 Male, age 74, both hemispheres 38.8
2457 Female, age 91, both hemispheres 37.5
2092 Male, age 76, both hemispheres 33.0
Reticular pontine nucleus, oral
nTPM: 34.9
1939 Male, age 80, both hemispheres 37.0
2012 Female, age 85, both hemispheres 34.8
2361 Male, age 74, both hemispheres 34.7
2167 Male, age 76, both hemispheres 34.3
2366 Female, age 91, both hemispheres 33.6
Reticulotegmental nucleus
nTPM: 39.3
2452 Male, age 74, both hemispheres 41.2
2333 Male, age 80, both hemispheres 40.9
2322 Female, age 91, both hemispheres 39.1
2325 Male, age 76, both hemispheres 36.1
Spinal trigeminal nucleus, caudal
nTPM: 39.3
2447 Male, age 76, both hemispheres 44.0
2308 Male, age 80, both hemispheres 41.5
2390 Female, age 91, both hemispheres 39.2
2312 Male, age 61, both hemispheres 36.1
2642 Male, age 74, both hemispheres 35.8
Spinal trigeminal nucleus, interpolar
nTPM: 37.7
2625 Male, age 61, both hemispheres 42.9
2033 Male, age 80, both hemispheres 39.3
2389 Female, age 91, both hemispheres 36.2
2066 Male, age 76, right hemisphere 35.8
2386 Female, age 85, both hemispheres 34.5
Spinal trigeminal nucleus, oral
nTPM: 40.0
2164 Male, age 80, both hemispheres 43.5
2737 Female, age 85, both hemispheres 41.6
1978 Male, age 76, both hemispheres 35.0
Spinal vestibular nucleus
nTPM: 40.8
2384 Male, age 74, both hemispheres 43.5
2780 Male, age 80, both hemispheres 43.0
2796 Male, age 61, both hemispheres 42.5
2186 Female, age 91, both hemispheres 40.5
2748 Male, age 76, both hemispheres 38.2
2806 Female, age 85, both hemispheres 37.1
Subcoeruleus area
nTPM: 36.9
2451 Male, age 74, both hemispheres 40.8
2089 Male, age 76, left hemisphere 40.3
2323 Female, age 91, left hemisphere 35.5
2369 Female, age 85, left hemisphere 35.5
1958 Male, age 80, both hemispheres 32.5
Superior olive
nTPM: 34.7
2329 Male, age 80, right hemisphere 38.8
2561 Female, age 91, both hemispheres 38.3
1875 Female, age 85, both hemispheres 33.8
2364 Male, age 74, right hemisphere 31.8
2020 Male, age 76, both hemispheres 31.0
Superior vestibular nucleus
nTPM: 35.7
2061 Male, age 76, both hemispheres 41.4
2015 Male, age 80, both hemispheres 35.8
2383 Male, age 74, both hemispheres 29.9
Ventral medullary reticular nucleus
nTPM: 36.7
2060 Male, age 76, both hemispheres 37.2
2372 Male, age 61, both hemispheres 36.2
Ventral periolivary nuclei
nTPM: 36.6
2130 Female, age 85, both hemispheres 39.4
2165 Male, age 80, both hemispheres 39.3
2794 Female, age 91, left hemisphere 38.2
2023 Male, age 76, both hemispheres 29.7
Ventrolateral medulla, A1-C1 cell groups
nTPM: 37.6
2302 Female, age 91, both hemispheres 42.5
2741 Female, age 85, both hemispheres 37.6
2118 Male, age 80, both hemispheres 37.4
1986 Male, age 76, both hemispheres 35.3
2180 Male, age 61, both hemispheres 35.1
Ventrolateral tegmental area, A5 NE cell group
nTPM: 36.7
2456 Female, age 91, both hemispheres 44.2
2161 Male, age 80, both hemispheres 38.3
2359 Male, age 61, both hemispheres 36.8
2449 Male, age 74, both hemispheres 35.2
2840 Female, age 85, both hemispheres 33.0
1959 Male, age 76, both hemispheres 32.8

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 15.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 15.1
FF:10165-103B3 76 years, female 17.5
FF:10182-103D2 60 years, female 12.8
Medulla oblongata
Scaled Tags Per Million: 14.2
FF:10155-103A2 76 years, female 17.4
FF:10038-101F2 18-64 years, mixed 15.9
FF:10174-103C3 60 years, female 9.3
Pons
Scaled Tags Per Million: 14.3
FF:10033-101E6 18-54 years, mixed 14.3

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 13.4
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 13.4
Samples: 4

Max nTPM: 14.4
Min nTPM: 11.5
Sample A Female 11.5
Sample B Female 14.3
Sample C Male 14.4
Sample D Male 13.4
11.512.713.911.413.9012345678910111213
 		Pons
nTPM: 12.7
Samples: 4

Max nTPM: 13.9
Min nTPM: 11.4
Sample A Female 13.9
Sample B Female 11.5
Sample C Male 11.4
Sample D Male 13.9

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 19.7
Mouse sample Sample description nTPM
18.919.420.218.521.602468101214161820
 		Pons and medulla
nTPM: 19.7
Samples: 4

Max nTPM: 21.6
Min nTPM: 18.5
Sample A Male 19.7
Sample B Male 19.0
Sample C Female 21.6
Sample D Female 18.5

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 2.2
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 2.2
69169505 Antisense, RP_050321_03_F12, Mouse strain C57BL/6J (56 days, male) 2.2
Pons
Expression energy: 1.7
69169505 Antisense, RP_050321_03_F12, Mouse strain C57BL/6J (56 days, male) 1.7

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