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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
117.8
nTPM
HPA Brain:
95.4
nTPM
GTEx:
117.8
nTPM
FANTOM5:
78.0
Scaled Tags Per Million
Pig:
66.0
nTPM
Mouse:
167.2
nTPM
Allen mouse:
7.5
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
95.4
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 76.5
2666
Male, age 74, left hemisphere
93.7
2586
Male, age 75, left hemisphere
92.3
2019
Male, age 18, unknown
84.8
1827
Male, age 72, unknown
83.5
2828
Female, age 72, unknown
75.9
2219
Male, age 76, both hemispheres
71.6
2411
Female, age 72, unknown
68.2
1870
Female, age 42, unknown
67.8
1833
Male, age 53, unknown
63.9
1830
Male, age 51, unknown
63.6
Dorsal raphe nucleus nTPM: 68.9
2298
Female, age 72, unknown
73.2
2047
Male, age 72, unknown
70.6
1828
Male, age 53, unknown
70.5
2750
Male, age 76, both hemispheres
69.5
2016
Female, age 72, unknown
60.6
Inferior colliculus nTPM: 63.6
1890
Male, age 53, unknown
69.1
2097
Female, age 72, unknown
67.0
2849
Male, age 72, unknown
60.0
1848
Female, age 42, unknown
58.2
Median raphe nucleus nTPM: 72.0
2220
Male, age 76, midline
72.0
Periaquaductal grey, anterior nTPM: 74.6
1947
Male, age 18, unknown
77.2
1795
Male, age 51, unknown
76.1
2502
Female, age 75, unknown
70.6
Periaquaductal grey, dorsal nTPM: 58.0
1840
Male, age 53, unknown
63.9
2850
Male, age 76, both hemispheres
58.1
2464
Female, age 72, unknown
55.1
1831
Male, age 72, unknown
54.8
Periaquaductal grey, lateral nTPM: 55.0
2140
Male, age 76, both hemispheres
55.8
2053
Male, age 18, unknown
55.3
2272
Male, age 74, both hemispheres
53.9
Pretectal area nTPM: 77.0
2007
Male, age 72, unknown
106.0
1817
Female, age 42, unknown
101.2
1815
Male, age 53, unknown
91.9
1816
Male, age 51, unknown
91.5
1944
Female, age 72, unknown
89.8
2667
Female, age 75, unknown
71.3
2407
Male, age 75, both hemispheres
62.7
2825
Male, age 18, unknown
61.9
2224
Female, age 72, unknown
60.8
2273
Male, age 74, both hemispheres
57.6
2316
Male, age 76, right hemisphere
52.2
Red nucleus nTPM: 73.1
2785
Male, age 18, unknown
86.2
1821
Female, age 72, unknown
82.7
2588
Male, age 74, left hemisphere
81.6
2725
Female, age 75, unknown
80.8
2503
Female, age 72, unknown
72.4
2584
Male, age 75, left hemisphere
71.2
1865
Male, age 51, unknown
70.3
1954
Female, age 42, unknown
67.7
1904
Male, age 53, unknown
67.5
2769
Male, age 72, unknown
66.4
2227
Male, age 72, unknown
66.3
2823
Male, age 76, right hemisphere
63.8
Substantia nigra nTPM: 95.4
1916
Female, age 42, unknown
145.7
1851
Male, age 51, unknown
110.1
2665
Male, age 74, both hemispheres
97.2
1889
Female, age 72, unknown
96.7
2241
Male, age 72, unknown
92.8
2409
Female, age 72, unknown
88.8
2699
Male, age 18, unknown
87.6
1941
Male, age 53, unknown
87.0
2583
Male, age 75, right hemisphere
80.1
2590
Female, age 75, unknown
68.2
Superior colliculus nTPM: 71.1
2668
Female, age 75, unknown
96.1
1796
Male, age 53, unknown
80.3
2087
Female, age 72, unknown
76.9
2664
Male, age 75, both hemispheres
75.2
2587
Male, age 74, left hemisphere
71.0
2261
Male, age 18, unknown
65.8
1839
Male, age 51, unknown
63.0
1913
Female, age 42, unknown
62.0
1895
Male, age 76, right hemisphere
60.9
1995
Male, age 72, unknown
59.4
Ventral tegmental area nTPM: 76.9
1915
Female, age 42, unknown
96.5
2410
Female, age 72, unknown
85.8
2218
Male, age 76, both hemispheres
78.4
1942
Male, age 51, unknown
71.1
2223
Female, age 72, unknown
69.1
2021
Male, age 53, unknown
60.3
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
117.8
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 117.8
Samples: 139
Max nTPM: 208.6
Min nTPM: 68.8
Std nTPM: 25.6
Median nTPM: 114.1
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
208.6
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
201.9
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
199.1
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
185.6
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
179.0
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
175.5
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
163.3
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
161.5
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
160.9
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
156.5
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
153.5
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
149.3
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
149.3
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
149.0
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
147.5
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
147.1
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
144.4
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
143.7
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
143.3
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
143.3
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
141.7
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
141.4
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
141.1
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
140.4
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
139.2
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
138.2
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
137.3
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
137.3
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
137.0
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
135.7
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
135.1
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
134.5
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
132.9
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
131.4
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
130.9
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
130.7
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
129.7
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
129.1
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
128.8
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
128.8
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
127.6
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
127.6
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
127.3
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
127.2
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
126.8
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
126.2
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
126.2
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
124.7
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
124.7
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
124.2
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
124.0
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
122.7
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
122.6
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
122.0
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
120.7
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
120.2
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
119.1
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
118.3
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
118.0
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
117.9
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
117.4
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
117.2
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
117.2
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
116.9
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
116.3
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
115.9
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
115.8
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
114.5
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
114.1
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
114.1
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
113.8
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
113.7
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
113.6
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
113.0
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
112.1
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
111.8
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
111.7
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
111.3
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
111.2
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
110.7
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
109.7
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
109.6
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
109.5
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
109.5
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
108.2
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
108.2
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
107.4
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
106.9
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
106.4
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
106.3
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
105.8
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
105.7
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
105.5
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
105.4
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
105.1
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
104.9
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
104.4
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
104.3
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
104.1
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
103.9
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
103.8
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
101.8
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
101.7
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
100.6
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
100.4
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
99.8
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
99.6
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
98.9
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
98.1
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
97.6
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
97.5
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
97.4
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
97.2
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
96.0
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
95.8
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
94.9
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
94.1
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
94.0
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
92.5
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
92.5
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
91.1
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
89.8
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
89.2
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
88.5
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
88.1
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
87.3
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
86.5
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
85.4
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
84.5
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
82.8
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
82.6
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
82.6
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
81.2
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
81.1
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
80.0
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
77.9
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
77.5
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
75.6
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
68.8
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
167.2
Mouse sample
Sample description
nTPM
Midbrain nTPM: 167.2
Samples: 4
Max nTPM: 177.4
Min nTPM: 157.5
Sample A
Male
177.4
Sample B
Male
163.4
Sample C
Female
157.5
Sample D
Female
170.4
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.