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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
84.7
nTPM
Monaco:
270.8
nTPM
Schmiedel:
396.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
84.7
HPA sample
nTPM
gdT-cell nTPM: 38.5
Samples: 6
Max nTPM: 48.2
Min nTPM: 26.2
P10809_1007
32.4
P10809_1022
48.2
P10809_1041
41.6
P10809_1060
38.0
P10809_1077
26.2
P10809_1098
44.7
MAIT T-cell nTPM: 84.8
Samples: 6
Max nTPM: 119.0
Min nTPM: 57.7
P10809_1006
108.8
P10809_1024
119.0
P10809_1043
57.7
P10809_1062
78.2
P10809_1083
62.9
P10809_1097
81.9
Memory CD4 T-cell nTPM: 42.1
Samples: 6
Max nTPM: 51.7
Min nTPM: 37.2
P10809_1014
51.7
P10809_1026
37.7
P10809_1045
47.3
P10809_1064
37.2
P10809_1086
39.2
P10809_1113
39.5
Memory CD8 T-cell nTPM: 49.0
Samples: 5
Max nTPM: 56.4
Min nTPM: 40.6
P10809_1012
56.4
P10809_1027
40.6
P10809_1046
42.2
P10809_1065
53.9
P10809_1111
52.1
Naive CD4 T-cell nTPM: 33.7
Samples: 6
Max nTPM: 46.4
Min nTPM: 24.8
P10809_1015
46.4
P10809_1030
31.8
P10809_1049
24.8
P10809_1068
32.6
P10809_1085
37.4
P10809_1112
29.4
Naive CD8 T-cell nTPM: 28.8
Samples: 6
Max nTPM: 38.2
Min nTPM: 22.9
P10809_1016
25.6
P10809_1031
38.2
P10809_1050
25.0
P10809_1069
35.8
P10809_1087
25.0
P10809_1110
22.9
T-reg nTPM: 14.8
Samples: 6
Max nTPM: 21.3
Min nTPM: 8.5
P10809_1018
21.3
P10809_1037
19.5
P10809_1056
10.9
P10809_1075
10.6
P10809_1094
8.5
P10809_1106
18.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
270.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 164.4
Samples: 4
Max nTPM: 191.5
Min nTPM: 142.2
RHH5202_R3573
191.5
RHH5230_R3602
142.2
RHH5259_R3631
171.0
RHH5288_R3660
152.7
Effector memory CD8 T-cell nTPM: 210.1
Samples: 4
Max nTPM: 261.1
Min nTPM: 169.6
RHH5203_R3574
261.1
RHH5231_R3603
169.6
RHH5260_R3632
196.0
RHH5289_R3661
213.7
MAIT T-cell nTPM: 270.8
Samples: 4
Max nTPM: 344.6
Min nTPM: 222.4
RHH5233_R3605
285.9
RHH5205_R3576
344.6
RHH5262_R3634
230.2
RHH5297_R3663
222.4
Memory CD4 T-cell TFH nTPM: 206.6
Samples: 4
Max nTPM: 259.1
Min nTPM: 162.3
RHH5300_R3666
162.3
RHH5236_R3608
259.1
RHH5265_R3637
207.4
RHH5208_R3579
197.5
Memory CD4 T-cell Th1 nTPM: 181.7
Samples: 4
Max nTPM: 206.7
Min nTPM: 164.9
RHH5210_R3581
184.2
RHH5302_R3668
164.9
RHH5238_R3610
206.7
RHH5267_R3639
170.9
Memory CD4 T-cell Th1/Th17 nTPM: 224.1
Samples: 4
Max nTPM: 279.6
Min nTPM: 182.3
RHH5303_R3669
210.0
RHH5211_R3582
224.5
RHH5239_R3611
279.6
RHH5268_R3640
182.3
Memory CD4 T-cell Th17 nTPM: 203.2
Samples: 4
Max nTPM: 250.5
Min nTPM: 177.1
RHH5304_R3670
206.0
RHH5212_R3583
179.2
RHH5240_R3612
250.5
RHH5269_R3641
177.1
Memory CD4 T-cell Th2 nTPM: 170.6
Samples: 4
Max nTPM: 182.4
Min nTPM: 162.2
RHH5305_R3671
162.2
RHH5213_R3584
182.4
RHH5241_R3613
173.6
RHH5270_R3642
164.2
Naive CD4 T-cell nTPM: 142.2
Samples: 4
Max nTPM: 155.5
Min nTPM: 116.2
RHH5306_R3672
116.2
RHH5214_R3585
150.3
RHH5242_R3614
155.5
RHH5271_R3643
146.9
Naive CD8 T-cell nTPM: 104.9
Samples: 4
Max nTPM: 156.2
Min nTPM: 80.8
RHH5201_R3572
156.2
RHH5229_R3601
88.8
RHH5258_R3630
80.8
RHH5287_R3659
93.8
Non-Vd2 gdTCR nTPM: 105.9
Samples: 4
Max nTPM: 126.5
Min nTPM: 66.8
RHH5235_R3607
126.5
RHH5264_R3636
117.6
RHH5207_R3578
112.7
RHH5299_R3665
66.8
T-reg nTPM: 90.9
Samples: 4
Max nTPM: 102.3
Min nTPM: 69.1
RHH5301_R3667
69.1
RHH5237_R3609
100.4
RHH5266_R3638
91.9
RHH5209_R3580
102.3
Terminal effector memory CD4 T-cell nTPM: 165.0
Samples: 2
Max nTPM: 172.2
Min nTPM: 157.8
RHH5243_R3615
172.2
RHH5272_R3644
157.8
Terminal effector memory CD8 T-cell nTPM: 121.8
Samples: 4
Max nTPM: 155.0
Min nTPM: 98.5
RHH5232_R3604
118.3
RHH5204_R3575
98.5
RHH5261_R3633
155.0
RHH5296_R3662
115.4
Vd2 gdTCR nTPM: 199.1
Samples: 4
Max nTPM: 271.0
Min nTPM: 155.0
RHH5234_R3606
208.4
RHH5206_R3577
162.1
RHH5263_R3635
271.0
RHH5298_R3664
155.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
