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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
33.1
nTPM
HPA Brain:
54.6
nTPM
GTEx:
33.1
nTPM
FANTOM5:
93.5
Scaled Tags Per Million
Pig:
21.0
nTPM
Mouse:
26.7
nTPM
Allen mouse:
3.5
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max nTPM
54.6
Sample id
Sample description
nTPM
Amygdala nTPM: 54.6
2814
Male, age 76, right hemisphere
67.5
2514
Male, age 75, right hemisphere
56.4
2695
Female, age 67, right hemisphere
55.1
2517
Female, age 94, left hemisphere
51.3
1987
Female, age 91, left hemisphere
42.9
Basal amygdala nTPM: 46.0
2110
Male, age 80, left hemisphere
58.6
2827
Female, age 67, right hemisphere
54.8
2685
Female, age 94, left hemisphere
49.5
2609
Male, age 75, right hemisphere
41.4
1955
Male, age 76, both hemispheres
40.9
2243
Female, age 91, right hemisphere
31.0
Central amygdala nTPM: 46.5
1905
Male, age 76, both hemispheres
54.9
2239
Male, age 80, left hemisphere
48.8
2515
Male, age 75, right hemisphere
46.3
2701
Female, age 91, right hemisphere
43.9
2826
Female, age 94, left hemisphere
38.8
Corticomedial amygdala nTPM: 36.9
2429
Female, age 94, left hemisphere
45.6
2428
Male, age 75, right hemisphere
44.1
2535
Female, age 67, right hemisphere
41.1
2829
Male, age 80, left hemisphere
33.8
2240
Male, age 76, both hemispheres
33.3
2242
Female, age 91, right hemisphere
23.4
Lateral amygdala nTPM: 54.6
2830
Female, age 67, right hemisphere
70.5
2516
Male, age 75, right hemisphere
58.4
1883
Male, age 76, both hemispheres
55.5
2256
Male, age 80, left hemisphere
51.7
2534
Female, age 94, left hemisphere
46.7
2255
Female, age 91, right hemisphere
44.9
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
33.1
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 33.1
Samples: 152
Max nTPM: 82.5
Min nTPM: 8.9
Std nTPM: 14.3
Median nTPM: 30.3
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
82.5
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
79.0
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
76.7
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
76.3
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
67.9
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
66.5
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
61.9
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
61.9
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
58.2
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
56.7
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
53.3
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
53.2
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
52.1
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
51.3
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
51.2
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
50.8
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
50.0
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
49.4
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
49.0
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
48.6
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
48.2
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
47.6
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
47.3
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
46.4
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
46.0
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
45.9
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
45.8
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
45.4
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
45.2
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
45.1
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
44.7
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
44.1
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
43.8
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
42.8
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
42.2
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
41.8
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
41.5
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
40.9
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
40.6
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
40.5
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
40.0
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
40.0
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
39.8
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
39.7
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
39.6
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
39.2
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
39.1
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
38.8
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
38.5
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
38.1
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
37.8
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
37.8
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
37.0
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
37.0
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
36.9
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
36.8
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
36.8
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
36.1
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
35.9
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
35.4
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
34.7
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
34.1
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
34.0
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
34.0
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
33.3
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
33.1
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
33.1
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
33.0
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
33.0
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
32.4
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
32.2
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
31.9
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
31.2
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
30.6
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
30.5
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
30.3
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
30.2
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
30.0
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
29.2
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
29.1
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
28.7
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
28.6
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
28.1
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
28.0
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
28.0
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
27.9
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
27.5
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
26.8
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
26.2
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
26.0
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
26.0
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
25.9
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
25.7
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
25.7
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
25.6
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
25.5
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
25.5
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
25.4
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
25.1
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
25.0
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
24.7
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
24.6
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
24.6
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
24.5
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
24.4
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
24.3
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
24.1
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
24.1
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
24.0
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
23.8
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
23.7
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
23.6
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
23.3
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
23.3
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
22.9
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
22.9
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
22.9
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
22.6
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
22.2
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
22.1
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
21.5
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
21.2
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
20.9
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
20.4
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
19.7
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
19.3
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
19.3
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
19.2
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
19.0
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
18.6
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
18.5
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
18.2
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
18.1
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
17.8
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
17.8
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
17.4
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
17.2
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
17.0
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
16.6
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
16.5
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
16.1
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
16.0
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
16.0
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
15.5
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
15.4
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
14.7
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
14.6
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
13.4
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
13.0
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
10.7
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
9.8
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
8.9
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
26.7
Mouse sample
Sample description
nTPM
Amygdala nTPM: 26.7
Samples: 4
Max nTPM: 28.9
Min nTPM: 22.0
Sample A
Male
22.0
Sample B
Male
28.0
Sample C
Female
28.9
Sample D
Female
27.8
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.