HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:466.8 nTPM
HPA Brain:981.6 nTPM
GTEx:466.8 nTPM
FANTOM5:3088.8 Scaled Tags Per Million
Pig:567.1 nTPM
Mouse:911.6 nTPM
Allen mouse:20.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001254Antibody CAB047313
Glial cells LowMedium
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 981.6
Sample id Sample description nTPM
Hippocampus
nTPM: 930.6
1898 Male, age 80, left hemisphere 1091.4
2529 Female, age 94, left hemisphere 1090.9
2148 Female, age 91, left hemisphere 933.9
1911 Female, age 85, right hemisphere 889.3
2621 Female, age 67, right hemisphere 876.7
1855 Male, age 76, left hemisphere 701.4
Dentate gyrus
nTPM: 815.8
2530 Female, age 94, left hemisphere 996.2
2528 Male, age 74, both hemispheres 977.5
2246 Female, age 85, both hemispheres 852.6
1927 Female, age 91, both hemispheres 747.0
2010 Male, age 76, both hemispheres 706.2
2531 Female, age 67, both hemispheres 615.1
Entorhinal gyrus
nTPM: 912.5
2764 Male, age 80, right hemisphere 1105.0
2117 Female, age 91, right hemisphere 1034.1
1938 Female, age 85, left hemisphere 1028.9
1787 Male, age 76, left hemisphere 816.0
2613 Female, age 94, left hemisphere 814.3
2686 Male, age 75, right hemisphere 676.9
Hippocampus, CA1
nTPM: 981.6
2749 Male, age 80, left hemisphere 1502.7
2527 Male, age 74, both hemispheres 1264.2
2082 Female, age 91, right hemisphere 894.5
1873 Female, age 85, both hemispheres 734.7
2045 Male, age 76, both hemispheres 512.0
Hippocampus, CA2
nTPM: 933.1
2249 Male, age 74, both hemispheres 1080.5
2437 Female, age 94, left hemisphere 998.5
1940 Female, age 85, left hemisphere 951.5
1963 Male, age 80, left hemisphere 944.6
2113 Female, age 91, right hemisphere 835.8
1892 Male, age 76, both hemispheres 787.3
Hippocampus, CA3
nTPM: 895.3
2137 Male, age 80, left hemisphere 1295.3
2436 Male, age 74, both hemispheres 1037.6
2861 Female, age 67, both hemispheres 845.1
1867 Male, age 76, both hemispheres 750.3
1891 Female, age 85, both hemispheres 747.9
2620 Female, age 94, left hemisphere 695.9
Parahippocampal cortex
nTPM: 917.3
2245 Female, age 91, both hemispheres 1180.9
2250 Female, age 67, right hemisphere 1032.7
1933 Female, age 85, both hemispheres 977.1
2622 Female, age 67, right hemisphere 958.3
2692 Male, age 74, both hemispheres 903.8
1850 Male, age 80, both hemispheres 900.3
1990 Female, age 91, right hemisphere 891.7
2532 Female, age 72, left hemisphere 832.1
2693 Female, age 94, both hemispheres 754.4
2018 Male, age 76, both hemispheres 741.3
Perirhinal gyrus
nTPM: 937.4
1794 Male, age 80, right hemisphere 1243.8
1847 Female, age 91, left hemisphere 1016.3
1841 Female, age 85, right hemisphere 886.8
2521 Female, age 94, right hemisphere 842.0
2848 Male, age 76, right hemisphere 698.4
Subiculum
nTPM: 906.6
2619 Male, age 74, both hemispheres 1059.4
1901 Male, age 80, both hemispheres 1037.7
1977 Female, age 85, both hemispheres 970.3
2438 Female, age 94, left hemisphere 881.0
2729 Female, age 91, right hemisphere 800.0
2042 Male, age 76, both hemispheres 691.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 466.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 466.8
Samples: 197

Max nTPM: 995.9
Min nTPM: 86.3
Std nTPM: 174.4
Median nTPM: 461.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 995.9
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 973.2
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 898.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 890.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 881.1
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 820.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 803.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 778.9
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 770.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 768.7
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 757.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 3088.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 3088.8
FF:10169-103B7 60 years, female 3092.8
FF:10153-102I9 76 years, female 3084.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 567.1
Pig sample Sample description nTPM
Subiculum
nTPM: 440.0
Samples: 4

Max nTPM: 579.7
Min nTPM: 359.8
Sample A Female 579.7
Sample B Female 399.4
Sample C Male 421.2
Sample D Male 359.8
Dorsal hippocampus
nTPM: 550.2
Samples: 4

Max nTPM: 724.3
Min nTPM: 418.4
Sample A Female 724.3
Sample B Female 456.7
Sample C Male 601.2
Sample D Male 418.4
Entorhinal cortex
nTPM: 565.1
Samples: 4

Max nTPM: 675.4
Min nTPM: 470.9
Sample A Female 568.8
Sample B Female 675.4
Sample C Male 545.2
Sample D Male 470.9
Ventral hippocampus
nTPM: 567.1
Samples: 4

Max nTPM: 751.8
Min nTPM: 374.7
Sample A Female 583.3
Sample B Female 374.7
Sample C Male 751.8
Sample D Male 558.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 911.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 911.6
Samples: 4

Max nTPM: 1047.5
Min nTPM: 804.6
Sample A Male 981.1
Sample B Male 1047.5
Sample C Female 813.0
Sample D Female 804.6
Hippocampal formation
nTPM: 830.0
Samples: 4

Max nTPM: 973.4
Min nTPM: 756.1
Sample A Male 756.1
Sample B Male 804.8
Sample C Female 785.7
Sample D Female 973.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 20.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 20.7
70927826 Antisense, RP_050725_01_B02, Mouse strain C57BL/6J (56 days, male) 20.8
393211 Antisense, RP_040804_02_D11, Mouse strain C57BL/6J (56 days, male) 20.7

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