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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
456.8
nTPM
GTEx:
456.8
nTPM
FANTOM5:
2086.8
Scaled Tags Per Million
Pig:
624.9
nTPM
Mouse:
1184.1
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
456.8
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 456.8
Samples: 105
Max nTPM: 1434.6
Min nTPM: 11.9
Std nTPM: 315.4
Median nTPM:
352_1
62 years, male
1434.6
356_1
87 years, female
1314.8
163_1
78 years, male
1161.4
354_1
81 years, female
1115.2
319_1
81 years, male
1063.2
353_1
82 years, female
1046.7
355_1
70 years, female
1014.6
386_1
76 years, male
955.7
377_1
82 years, female
939.2
172_1
72 years, female
924.7
351_1
91 years, male
886.3
350_1
84 years, female
873.0
218_1
71 years, female
813.6
349_1
83 years, male
796.6
292_1
71 years, male
796.0
376_1
75 years, female
789.6
394_1
75 years, female
786.1
243_1
75 years, male
765.7
177_1
74 years, male
758.3
452_1
88 years, female
755.2
506_1
65 years, male
755.1
320_1
89 years, female
740.7
251_1
78 years, male
718.7
503_1
68 years, male
709.0
425_1
59 years, female
697.0
335_1
73 years, female
694.2
293_1
68 years, female
682.6
517_1
88 years, male
649.8
321_1
62 years, female
626.3
286_1
68 years, female
616.7
237_1
82 years, male
608.4
389_1
86 years, female
606.7
480_1
63 years, male
600.5
406_1
79 years, male
594.2
6_1
73 years, female
566.4
295_1
61 years, female
553.9
384_1
83 years, male
542.1
189_1
76 years, male
529.6
264_1
73 years, female
528.9
348_1
84 years, male
526.3
447_1
81 years, male
525.4
318_1
68 years, male
522.1
322_1
76 years, male
504.6
379_1
60 years, male
503.7
316_1
62 years, male
482.7
375_1
74 years, female
481.5
526_1
61 years, male
464.2
99_1
64 years, male
446.7
173_1
67 years, male
441.4
291_1
76 years, male
436.0
404_1
82 years, female
434.7
405_1
91 years, male
425.1
217_1
76 years, male
413.8
229_1
69 years, female
411.5
115_1
83 years, male
410.4
317_1
60 years, male
405.0
153_1
70 years, female
398.9
9_1
66 years, female
396.9
468_1
89 years, male
380.5
137_1
83 years, male
349.0
396_1
62 years, male
325.5
254_1
77 years, female
324.9
4_1
88 years, female
322.8
2_1
77 years, female
310.1
246_1
77 years, male
309.0
18_1
88 years, male
296.9
518_1
75 years, female
290.3
265_1
87 years, male
287.0
145_1
84 years, male
276.9
35_1
74 years, female
269.9
17_1
71 years, male
263.1
266_1
85 years, male
261.7
347_1
72 years, male
258.7
126_1
63 years, male
231.1
120_1
70 years, female
227.1
288_1
66 years, female
225.7
109_1
81 years, female
216.7
42_1
85 years, male
208.4
117_1
61 years, male
180.1
41_1
94 years, female
174.1
314_1
67 years, male
168.9
311_1
78 years, male
158.5
324_1
76 years, male
153.2
162_1
79 years, female
152.9
81_1
67 years, male
141.7
313_1
79 years, female
137.0
307_1
66 years, female
134.3
499_1
55 years, female
133.5
32_1
67 years, male
126.4
142_1
61 years, female
126.4
315_1
62 years, female
102.5
139_1
64 years, female
100.3
43_1
64 years, female
90.4
119_1
70 years, female
69.2
415_1
77 years, female
68.7
414_1
84 years, female
67.1
89_1
63 years, male
65.7
501_1
88 years, male
60.0
466_1
57 years, female
58.3
308_1
70 years, female
56.0
149_1
88 years, male
50.7
495_1
57 years, female
47.1
413_1
59 years, female
36.1
490_1
67 years, female
16.0
491_1
89 years, female
11.9
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.