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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
72.8
nTPM
Monaco:
180.9
nTPM
Schmiedel:
638.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
72.8
HPA sample
nTPM
gdT-cell nTPM: 47.3
Samples: 6
Max nTPM: 58.4
Min nTPM: 31.6
P10809_1007
49.5
P10809_1022
58.4
P10809_1041
31.6
P10809_1060
36.7
P10809_1077
52.6
P10809_1098
55.2
MAIT T-cell nTPM: 72.8
Samples: 6
Max nTPM: 99.7
Min nTPM: 55.1
P10809_1006
89.5
P10809_1024
75.6
P10809_1043
55.1
P10809_1062
56.1
P10809_1083
60.9
P10809_1097
99.7
Memory CD4 T-cell nTPM: 54.2
Samples: 6
Max nTPM: 74.8
Min nTPM: 38.4
P10809_1014
74.8
P10809_1026
59.3
P10809_1045
54.1
P10809_1064
38.4
P10809_1086
49.1
P10809_1113
49.4
Memory CD8 T-cell nTPM: 61.5
Samples: 5
Max nTPM: 77.1
Min nTPM: 51.4
P10809_1012
72.1
P10809_1027
77.1
P10809_1046
51.4
P10809_1065
52.2
P10809_1111
54.5
Naive CD4 T-cell nTPM: 62.4
Samples: 6
Max nTPM: 84.1
Min nTPM: 54.8
P10809_1015
84.1
P10809_1030
57.7
P10809_1049
58.2
P10809_1068
59.4
P10809_1085
54.8
P10809_1112
60.2
Naive CD8 T-cell nTPM: 68.8
Samples: 6
Max nTPM: 89.5
Min nTPM: 50.1
P10809_1016
89.5
P10809_1031
79.9
P10809_1050
61.0
P10809_1069
69.6
P10809_1087
50.1
P10809_1110
62.4
T-reg nTPM: 63.9
Samples: 6
Max nTPM: 79.0
Min nTPM: 54.5
P10809_1018
63.4
P10809_1037
67.2
P10809_1056
62.2
P10809_1075
57.1
P10809_1094
79.0
P10809_1106
54.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
180.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 139.9
Samples: 4
Max nTPM: 163.1
Min nTPM: 115.6
RHH5202_R3573
163.1
RHH5230_R3602
144.5
RHH5259_R3631
115.6
RHH5288_R3660
136.5
Effector memory CD8 T-cell nTPM: 155.1
Samples: 4
Max nTPM: 172.1
Min nTPM: 130.2
RHH5203_R3574
172.1
RHH5231_R3603
130.2
RHH5260_R3632
154.7
RHH5289_R3661
163.3
MAIT T-cell nTPM: 159.4
Samples: 4
Max nTPM: 210.5
Min nTPM: 120.6
RHH5233_R3605
120.6
RHH5205_R3576
210.5
RHH5262_R3634
182.0
RHH5297_R3663
124.4
Memory CD4 T-cell TFH nTPM: 139.8
Samples: 4
Max nTPM: 165.4
Min nTPM: 93.1
RHH5300_R3666
93.1
RHH5236_R3608
140.6
RHH5265_R3637
159.9
RHH5208_R3579
165.4
Memory CD4 T-cell Th1 nTPM: 128.1
Samples: 4
Max nTPM: 148.1
Min nTPM: 97.7
RHH5210_R3581
142.6
RHH5302_R3668
123.9
RHH5238_R3610
97.7
RHH5267_R3639
148.1
Memory CD4 T-cell Th1/Th17 nTPM: 127.7
Samples: 4
Max nTPM: 156.0
Min nTPM: 111.9
RHH5303_R3669
111.9
RHH5211_R3582
156.0
RHH5239_R3611
114.3
RHH5268_R3640
128.7
Memory CD4 T-cell Th17 nTPM: 156.7
Samples: 4
Max nTPM: 185.6
Min nTPM: 132.0
RHH5304_R3670
147.5
RHH5212_R3583
185.6
RHH5240_R3612
132.0
RHH5269_R3641
161.8
Memory CD4 T-cell Th2 nTPM: 146.7
Samples: 4
Max nTPM: 171.1
Min nTPM: 129.2
RHH5305_R3671
137.3
RHH5213_R3584
171.1
RHH5241_R3613
129.2
RHH5270_R3642
149.2
Naive CD4 T-cell nTPM: 159.2
Samples: 4
Max nTPM: 180.4
Min nTPM: 125.7
RHH5306_R3672
157.0
RHH5214_R3585
173.8
RHH5242_R3614
125.7
RHH5271_R3643
180.4
Naive CD8 T-cell nTPM: 180.9
Samples: 4
Max nTPM: 234.7
Min nTPM: 117.2
RHH5201_R3572
234.7
RHH5229_R3601
117.2
RHH5258_R3630
189.2
RHH5287_R3659
182.3
Non-Vd2 gdTCR nTPM: 122.7
Samples: 4
Max nTPM: 144.4
Min nTPM: 87.6
RHH5235_R3607
117.9
RHH5264_R3636
144.4
RHH5207_R3578
140.7
RHH5299_R3665
87.6
T-reg nTPM: 151.1
Samples: 4
Max nTPM: 174.6
Min nTPM: 118.1
RHH5301_R3667
118.1
RHH5237_R3609
151.8
RHH5266_R3638
174.6
RHH5209_R3580
159.9
Terminal effector memory CD4 T-cell nTPM: 109.6
Samples: 2
Max nTPM: 111.2
Min nTPM: 108.0
RHH5243_R3615
111.2
RHH5272_R3644
108.0
Terminal effector memory CD8 T-cell nTPM: 129.0
Samples: 4
Max nTPM: 140.9
Min nTPM: 110.0
RHH5232_R3604
135.6
RHH5204_R3575
129.5
RHH5261_R3633
140.9
RHH5296_R3662
110.0
Vd2 gdTCR nTPM: 125.9
Samples: 4
Max nTPM: 158.1
Min nTPM: 108.9
RHH5234_R3606
108.9
RHH5206_R3577
127.1
RHH5263_R3635
158.1
RHH5298_R3664
109.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
