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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
184.2
nTPM
Monaco:
84.5
nTPM
Schmiedel:
14.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
184.2
HPA sample
nTPM
gdT-cell nTPM: 184.2
Samples: 6
Max nTPM: 264.5
Min nTPM: 91.1
P10809_1007
205.6
P10809_1022
178.9
P10809_1041
189.9
P10809_1060
91.1
P10809_1077
175.3
P10809_1098
264.5
MAIT T-cell nTPM: 128.4
Samples: 6
Max nTPM: 164.9
Min nTPM: 77.1
P10809_1006
119.1
P10809_1024
77.1
P10809_1043
164.1
P10809_1062
104.8
P10809_1083
140.1
P10809_1097
164.9
Memory CD4 T-cell nTPM: 74.3
Samples: 6
Max nTPM: 117.8
Min nTPM: 33.3
P10809_1014
48.8
P10809_1026
84.3
P10809_1045
69.8
P10809_1064
117.8
P10809_1086
91.5
P10809_1113
33.3
Memory CD8 T-cell nTPM: 147.2
Samples: 5
Max nTPM: 203.9
Min nTPM: 93.7
P10809_1012
113.2
P10809_1027
93.7
P10809_1046
203.9
P10809_1065
178.9
P10809_1111
146.3
Naive CD4 T-cell nTPM: 44.0
Samples: 6
Max nTPM: 63.1
Min nTPM: 30.2
P10809_1015
30.2
P10809_1030
38.3
P10809_1049
57.5
P10809_1068
33.7
P10809_1085
63.1
P10809_1112
41.3
Naive CD8 T-cell nTPM: 82.6
Samples: 6
Max nTPM: 136.6
Min nTPM: 30.3
P10809_1016
30.3
P10809_1031
59.2
P10809_1050
102.1
P10809_1069
136.6
P10809_1087
100.8
P10809_1110
66.3
T-reg nTPM: 76.6
Samples: 6
Max nTPM: 147.5
Min nTPM: 48.5
P10809_1018
50.4
P10809_1037
79.8
P10809_1056
147.5
P10809_1075
81.4
P10809_1094
48.5
P10809_1106
51.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
84.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 17.1
Samples: 4
Max nTPM: 24.0
Min nTPM: 6.7
RHH5202_R3573
6.7
RHH5230_R3602
24.0
RHH5259_R3631
21.8
RHH5288_R3660
15.9
Effector memory CD8 T-cell nTPM: 69.2
Samples: 4
Max nTPM: 110.4
Min nTPM: 32.4
RHH5203_R3574
59.3
RHH5231_R3603
74.5
RHH5260_R3632
110.4
RHH5289_R3661
32.4
MAIT T-cell nTPM: 79.2
Samples: 4
Max nTPM: 150.0
Min nTPM: 35.1
RHH5233_R3605
35.1
RHH5205_R3576
58.8
RHH5262_R3634
150.0
RHH5297_R3663
73.0
Memory CD4 T-cell TFH nTPM: 25.5
Samples: 4
Max nTPM: 44.4
Min nTPM: 1.8
RHH5300_R3666
25.7
RHH5236_R3608
44.4
RHH5265_R3637
30.1
RHH5208_R3579
1.8
Memory CD4 T-cell Th1 nTPM: 21.6
Samples: 4
Max nTPM: 39.8
Min nTPM: 12.4
RHH5210_R3581
17.2
RHH5302_R3668
12.4
RHH5238_R3610
16.9
RHH5267_R3639
39.8
Memory CD4 T-cell Th1/Th17 nTPM: 27.3
Samples: 4
Max nTPM: 44.0
Min nTPM: 10.1
RHH5303_R3669
13.2
RHH5211_R3582
41.7
RHH5239_R3611
10.1
RHH5268_R3640
44.0
Memory CD4 T-cell Th17 nTPM: 38.1
Samples: 4
Max nTPM: 70.1
Min nTPM: 10.1
RHH5304_R3670
21.4
RHH5212_R3583
50.7
RHH5240_R3612
10.1
RHH5269_R3641
70.1
Memory CD4 T-cell Th2 nTPM: 26.1
Samples: 4
Max nTPM: 42.9
Min nTPM: 4.7
RHH5305_R3671
30.3
RHH5213_R3584
26.3
RHH5241_R3613
4.7
RHH5270_R3642
42.9
Naive CD4 T-cell nTPM: 25.1
Samples: 4
Max nTPM: 31.2
Min nTPM: 15.6
RHH5306_R3672
24.4
RHH5214_R3585
31.2
RHH5242_R3614
15.6
RHH5271_R3643
29.3
Naive CD8 T-cell nTPM: 11.5
Samples: 4
Max nTPM: 25.2
Min nTPM: 0.7
RHH5201_R3572
0.7
RHH5229_R3601
11.8
RHH5258_R3630
25.2
RHH5287_R3659
8.3
Non-Vd2 gdTCR nTPM: 84.5
Samples: 4
Max nTPM: 125.8
Min nTPM: 58.9
RHH5235_R3607
88.1
RHH5264_R3636
58.9
RHH5207_R3578
65.2
RHH5299_R3665
125.8
T-reg nTPM: 31.1
Samples: 4
Max nTPM: 36.0
Min nTPM: 26.2
RHH5301_R3667
36.0
RHH5237_R3609
26.2
RHH5266_R3638
33.0
RHH5209_R3580
29.1
Terminal effector memory CD4 T-cell nTPM: 77.0
Samples: 2
Max nTPM: 100.2
Min nTPM: 53.7
RHH5243_R3615
100.2
RHH5272_R3644
53.7
Terminal effector memory CD8 T-cell nTPM: 77.0
Samples: 4
Max nTPM: 110.2
Min nTPM: 45.4
RHH5232_R3604
63.6
RHH5204_R3575
88.9
RHH5261_R3633
110.2
RHH5296_R3662
45.4
Vd2 gdTCR nTPM: 74.8
Samples: 4
Max nTPM: 85.9
Min nTPM: 48.4
RHH5234_R3606
48.4
RHH5206_R3577
85.2
RHH5263_R3635
85.9
RHH5298_R3664
79.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
