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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
85.7
nTPM
Monaco:
226.7
nTPM
Schmiedel:
116.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
85.7
HPA sample
nTPM
gdT-cell nTPM: 23.3
Samples: 6
Max nTPM: 30.6
Min nTPM: 16.4
P10809_1007
19.5
P10809_1022
27.6
P10809_1041
16.4
P10809_1060
24.5
P10809_1077
21.1
P10809_1098
30.6
MAIT T-cell nTPM: 25.2
Samples: 6
Max nTPM: 29.6
Min nTPM: 19.2
P10809_1006
26.8
P10809_1024
28.0
P10809_1043
25.3
P10809_1062
29.6
P10809_1083
19.2
P10809_1097
22.3
Memory CD4 T-cell nTPM: 32.6
Samples: 6
Max nTPM: 40.3
Min nTPM: 26.5
P10809_1014
29.1
P10809_1026
32.3
P10809_1045
38.9
P10809_1064
26.5
P10809_1086
28.6
P10809_1113
40.3
Memory CD8 T-cell nTPM: 30.3
Samples: 5
Max nTPM: 37.7
Min nTPM: 19.6
P10809_1012
34.9
P10809_1027
24.1
P10809_1046
35.1
P10809_1065
19.6
P10809_1111
37.7
Naive CD4 T-cell nTPM: 85.7
Samples: 6
Max nTPM: 134.9
Min nTPM: 67.2
P10809_1015
72.3
P10809_1030
68.6
P10809_1049
68.6
P10809_1068
134.9
P10809_1085
67.2
P10809_1112
102.7
Naive CD8 T-cell nTPM: 51.7
Samples: 6
Max nTPM: 66.2
Min nTPM: 17.4
P10809_1016
66.2
P10809_1031
56.5
P10809_1050
47.9
P10809_1069
57.3
P10809_1087
17.4
P10809_1110
64.8
T-reg nTPM: 48.8
Samples: 6
Max nTPM: 68.5
Min nTPM: 39.8
P10809_1018
39.8
P10809_1037
46.5
P10809_1056
52.0
P10809_1075
40.3
P10809_1094
68.5
P10809_1106
45.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
226.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 105.7
Samples: 4
Max nTPM: 116.3
Min nTPM: 87.2
RHH5202_R3573
115.1
RHH5230_R3602
104.1
RHH5259_R3631
116.3
RHH5288_R3660
87.2
Effector memory CD8 T-cell nTPM: 80.7
Samples: 4
Max nTPM: 90.6
Min nTPM: 72.1
RHH5203_R3574
90.6
RHH5231_R3603
74.4
RHH5260_R3632
72.1
RHH5289_R3661
85.7
MAIT T-cell nTPM: 76.7
Samples: 4
Max nTPM: 85.0
Min nTPM: 67.9
RHH5233_R3605
67.9
RHH5205_R3576
85.0
RHH5262_R3634
81.3
RHH5297_R3663
72.7
Memory CD4 T-cell TFH nTPM: 118.3
Samples: 4
Max nTPM: 153.3
Min nTPM: 102.3
RHH5300_R3666
107.1
RHH5236_R3608
110.6
RHH5265_R3637
102.3
RHH5208_R3579
153.3
Memory CD4 T-cell Th1 nTPM: 137.7
Samples: 4
Max nTPM: 159.6
Min nTPM: 121.7
RHH5210_R3581
159.6
RHH5302_R3668
121.7
RHH5238_R3610
142.7
RHH5267_R3639
126.9
Memory CD4 T-cell Th1/Th17 nTPM: 106.8
Samples: 4
Max nTPM: 139.2
Min nTPM: 77.1
RHH5303_R3669
97.7
RHH5211_R3582
77.1
RHH5239_R3611
139.2
RHH5268_R3640
113.1
Memory CD4 T-cell Th17 nTPM: 111.2
Samples: 4
Max nTPM: 152.2
Min nTPM: 90.1
RHH5304_R3670
101.4
RHH5212_R3583
90.1
RHH5240_R3612
152.2
RHH5269_R3641
101.0
Memory CD4 T-cell Th2 nTPM: 106.8
Samples: 4
Max nTPM: 115.4
Min nTPM: 97.9
RHH5305_R3671
115.4
RHH5213_R3584
113.6
RHH5241_R3613
97.9
RHH5270_R3642
100.2
Naive CD4 T-cell nTPM: 226.7
Samples: 4
Max nTPM: 248.9
Min nTPM: 211.2
RHH5306_R3672
211.2
RHH5214_R3585
217.7
RHH5242_R3614
228.9
RHH5271_R3643
248.9
Naive CD8 T-cell nTPM: 205.4
Samples: 4
Max nTPM: 220.5
Min nTPM: 183.0
RHH5201_R3572
220.5
RHH5229_R3601
183.0
RHH5258_R3630
220.1
RHH5287_R3659
198.1
Non-Vd2 gdTCR nTPM: 68.3
Samples: 4
Max nTPM: 74.7
Min nTPM: 56.7
RHH5235_R3607
67.2
RHH5264_R3636
74.7
RHH5207_R3578
74.7
RHH5299_R3665
56.7
T-reg nTPM: 149.2
Samples: 4
Max nTPM: 163.8
Min nTPM: 130.6
RHH5301_R3667
130.6
RHH5237_R3609
163.8
RHH5266_R3638
153.5
RHH5209_R3580
148.9
Terminal effector memory CD4 T-cell nTPM: 85.1
Samples: 2
Max nTPM: 111.4
Min nTPM: 58.7
RHH5243_R3615
58.7
RHH5272_R3644
111.4
Terminal effector memory CD8 T-cell nTPM: 60.8
Samples: 4
Max nTPM: 70.8
Min nTPM: 49.8
RHH5232_R3604
70.8
RHH5204_R3575
61.5
RHH5261_R3633
60.9
RHH5296_R3662
49.8
Vd2 gdTCR nTPM: 83.5
Samples: 4
Max nTPM: 115.7
Min nTPM: 59.0
RHH5234_R3606
86.3
RHH5206_R3577
59.0
RHH5263_R3635
115.7
RHH5298_R3664
72.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
