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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
143.2
nTPM
Monaco:
199.7
nTPM
Schmiedel:
3.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
143.2
HPA sample
nTPM
gdT-cell nTPM: 127.5
Samples: 6
Max nTPM: 161.9
Min nTPM: 78.8
P10809_1007
78.8
P10809_1022
143.3
P10809_1041
161.9
P10809_1060
125.3
P10809_1077
127.0
P10809_1098
128.9
MAIT T-cell nTPM: 125.1
Samples: 6
Max nTPM: 157.8
Min nTPM: 79.2
P10809_1006
79.2
P10809_1024
157.8
P10809_1043
147.6
P10809_1062
131.2
P10809_1083
113.1
P10809_1097
121.9
Memory CD4 T-cell nTPM: 114.7
Samples: 6
Max nTPM: 139.1
Min nTPM: 71.4
P10809_1014
71.4
P10809_1026
138.9
P10809_1045
139.1
P10809_1064
110.8
P10809_1086
117.4
P10809_1113
110.4
Memory CD8 T-cell nTPM: 122.3
Samples: 5
Max nTPM: 149.3
Min nTPM: 92.2
P10809_1012
92.2
P10809_1027
149.3
P10809_1046
140.9
P10809_1065
110.8
P10809_1111
118.4
Naive CD4 T-cell nTPM: 70.4
Samples: 6
Max nTPM: 91.1
Min nTPM: 36.4
P10809_1015
36.4
P10809_1030
75.8
P10809_1049
91.1
P10809_1068
66.7
P10809_1085
84.6
P10809_1112
68.0
Naive CD8 T-cell nTPM: 88.8
Samples: 6
Max nTPM: 119.2
Min nTPM: 37.5
P10809_1016
37.5
P10809_1031
119.2
P10809_1050
103.0
P10809_1069
89.0
P10809_1087
116.6
P10809_1110
67.3
T-reg nTPM: 143.2
Samples: 6
Max nTPM: 243.1
Min nTPM: 92.2
P10809_1018
92.2
P10809_1037
127.4
P10809_1056
243.1
P10809_1075
118.7
P10809_1094
146.1
P10809_1106
131.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
199.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 102.0
Samples: 4
Max nTPM: 116.4
Min nTPM: 85.9
RHH5202_R3573
95.3
RHH5230_R3602
116.4
RHH5259_R3631
85.9
RHH5288_R3660
110.3
Effector memory CD8 T-cell nTPM: 194.9
Samples: 4
Max nTPM: 219.5
Min nTPM: 165.8
RHH5203_R3574
210.0
RHH5231_R3603
219.5
RHH5260_R3632
165.8
RHH5289_R3661
184.1
MAIT T-cell nTPM: 138.3
Samples: 4
Max nTPM: 165.6
Min nTPM: 116.2
RHH5233_R3605
117.8
RHH5205_R3576
153.7
RHH5262_R3634
165.6
RHH5297_R3663
116.2
Memory CD4 T-cell TFH nTPM: 126.6
Samples: 4
Max nTPM: 131.7
Min nTPM: 119.8
RHH5300_R3666
127.7
RHH5236_R3608
127.0
RHH5265_R3637
119.8
RHH5208_R3579
131.7
Memory CD4 T-cell Th1 nTPM: 120.5
Samples: 4
Max nTPM: 158.8
Min nTPM: 93.3
RHH5210_R3581
102.6
RHH5302_R3668
127.3
RHH5238_R3610
93.3
RHH5267_R3639
158.8
Memory CD4 T-cell Th1/Th17 nTPM: 146.6
Samples: 4
Max nTPM: 176.4
Min nTPM: 96.1
RHH5303_R3669
158.7
RHH5211_R3582
155.2
RHH5239_R3611
96.1
RHH5268_R3640
176.4
Memory CD4 T-cell Th17 nTPM: 139.3
Samples: 4
Max nTPM: 176.0
Min nTPM: 113.4
RHH5304_R3670
176.0
RHH5212_R3583
113.4
RHH5240_R3612
142.8
RHH5269_R3641
125.0
Memory CD4 T-cell Th2 nTPM: 159.3
Samples: 4
Max nTPM: 171.9
Min nTPM: 139.3
RHH5305_R3671
162.1
RHH5213_R3584
163.9
RHH5241_R3613
139.3
RHH5270_R3642
171.9
Naive CD4 T-cell nTPM: 83.9
Samples: 4
Max nTPM: 95.0
Min nTPM: 63.6
RHH5306_R3672
95.0
RHH5214_R3585
90.6
RHH5242_R3614
63.6
RHH5271_R3643
86.2
Naive CD8 T-cell nTPM: 65.9
Samples: 4
Max nTPM: 88.4
Min nTPM: 32.7
RHH5201_R3572
72.5
RHH5229_R3601
32.7
RHH5258_R3630
88.4
RHH5287_R3659
69.9
Non-Vd2 gdTCR nTPM: 199.7
Samples: 4
Max nTPM: 249.6
Min nTPM: 146.6
RHH5235_R3607
146.6
RHH5264_R3636
249.6
RHH5207_R3578
210.0
RHH5299_R3665
192.5
T-reg nTPM: 123.2
Samples: 4
Max nTPM: 159.6
Min nTPM: 105.7
RHH5301_R3667
114.8
RHH5237_R3609
159.6
RHH5266_R3638
112.6
RHH5209_R3580
105.7
Terminal effector memory CD4 T-cell nTPM: 169.6
Samples: 2
Max nTPM: 201.6
Min nTPM: 137.6
RHH5243_R3615
137.6
RHH5272_R3644
201.6
Terminal effector memory CD8 T-cell nTPM: 178.1
Samples: 4
Max nTPM: 191.2
Min nTPM: 154.1
RHH5232_R3604
186.8
RHH5204_R3575
154.1
RHH5261_R3633
191.2
RHH5296_R3662
180.4
Vd2 gdTCR nTPM: 144.0
Samples: 4
Max nTPM: 179.2
Min nTPM: 112.9
RHH5234_R3606
131.0
RHH5206_R3577
179.2
RHH5263_R3635
152.7
RHH5298_R3664
112.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
