We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
60.8
nTPM
Monaco:
133.9
nTPM
Schmiedel:
223.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
60.8
HPA sample
nTPM
gdT-cell nTPM: 40.2
Samples: 6
Max nTPM: 57.3
Min nTPM: 29.6
P10809_1007
40.0
P10809_1022
57.3
P10809_1041
39.2
P10809_1060
29.6
P10809_1077
37.1
P10809_1098
38.2
MAIT T-cell nTPM: 30.5
Samples: 6
Max nTPM: 41.9
Min nTPM: 24.1
P10809_1006
33.0
P10809_1024
41.9
P10809_1043
30.9
P10809_1062
24.1
P10809_1083
26.2
P10809_1097
27.1
Memory CD4 T-cell nTPM: 31.7
Samples: 6
Max nTPM: 38.0
Min nTPM: 26.1
P10809_1014
32.9
P10809_1026
26.1
P10809_1045
35.0
P10809_1064
28.1
P10809_1086
38.0
P10809_1113
30.3
Memory CD8 T-cell nTPM: 41.3
Samples: 5
Max nTPM: 54.7
Min nTPM: 32.0
P10809_1012
42.0
P10809_1027
54.7
P10809_1046
40.1
P10809_1065
37.8
P10809_1111
32.0
Naive CD4 T-cell nTPM: 20.4
Samples: 6
Max nTPM: 24.7
Min nTPM: 17.5
P10809_1015
18.5
P10809_1030
21.8
P10809_1049
21.8
P10809_1068
17.5
P10809_1085
24.7
P10809_1112
18.2
Naive CD8 T-cell nTPM: 27.5
Samples: 6
Max nTPM: 40.2
Min nTPM: 19.5
P10809_1016
19.9
P10809_1031
21.9
P10809_1050
23.5
P10809_1069
40.1
P10809_1087
40.2
P10809_1110
19.5
T-reg nTPM: 60.8
Samples: 6
Max nTPM: 67.4
Min nTPM: 55.6
P10809_1018
60.0
P10809_1037
55.6
P10809_1056
67.4
P10809_1075
58.3
P10809_1094
61.6
P10809_1106
61.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
133.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 25.1
Samples: 4
Max nTPM: 49.4
Min nTPM: 6.8
RHH5202_R3573
6.8
RHH5230_R3602
49.4
RHH5259_R3631
17.7
RHH5288_R3660
26.6
Effector memory CD8 T-cell nTPM: 133.9
Samples: 4
Max nTPM: 200.6
Min nTPM: 68.4
RHH5203_R3574
68.4
RHH5231_R3603
200.6
RHH5260_R3632
178.3
RHH5289_R3661
88.2
MAIT T-cell nTPM: 57.8
Samples: 4
Max nTPM: 80.2
Min nTPM: 36.8
RHH5233_R3605
63.6
RHH5205_R3576
36.8
RHH5262_R3634
80.2
RHH5297_R3663
50.5
Memory CD4 T-cell TFH nTPM: 36.9
Samples: 4
Max nTPM: 61.1
Min nTPM: 14.0
RHH5300_R3666
38.7
RHH5236_R3608
61.1
RHH5265_R3637
33.7
RHH5208_R3579
14.0
Memory CD4 T-cell Th1 nTPM: 61.8
Samples: 4
Max nTPM: 88.9
Min nTPM: 35.6
RHH5210_R3581
35.6
RHH5302_R3668
88.9
RHH5238_R3610
72.6
RHH5267_R3639
50.0
Memory CD4 T-cell Th1/Th17 nTPM: 66.2
Samples: 4
Max nTPM: 86.2
Min nTPM: 44.9
RHH5303_R3669
67.6
RHH5211_R3582
86.2
RHH5239_R3611
65.9
RHH5268_R3640
44.9
Memory CD4 T-cell Th17 nTPM: 94.9
Samples: 4
Max nTPM: 142.3
Min nTPM: 56.0
RHH5304_R3670
89.5
RHH5212_R3583
91.6
RHH5240_R3612
142.3
RHH5269_R3641
56.0
Memory CD4 T-cell Th2 nTPM: 51.6
Samples: 4
Max nTPM: 82.9
Min nTPM: 22.4
RHH5305_R3671
66.8
RHH5213_R3584
82.9
RHH5241_R3613
34.3
RHH5270_R3642
22.4
Naive CD4 T-cell nTPM: 35.1
Samples: 4
Max nTPM: 60.6
Min nTPM: 13.9
RHH5306_R3672
60.6
RHH5214_R3585
42.8
RHH5242_R3614
13.9
RHH5271_R3643
23.2
Naive CD8 T-cell nTPM: 34.9
Samples: 4
Max nTPM: 89.6
Min nTPM: 12.7
RHH5201_R3572
17.7
RHH5229_R3601
89.6
RHH5258_R3630
19.4
RHH5287_R3659
12.7
Non-Vd2 gdTCR nTPM: 104.9
Samples: 4
Max nTPM: 174.5
Min nTPM: 58.5
RHH5235_R3607
113.6
RHH5264_R3636
174.5
RHH5207_R3578
73.0
RHH5299_R3665
58.5
T-reg nTPM: 71.7
Samples: 4
Max nTPM: 106.7
Min nTPM: 49.0
RHH5301_R3667
71.2
RHH5237_R3609
106.7
RHH5266_R3638
49.0
RHH5209_R3580
60.0
Terminal effector memory CD4 T-cell nTPM: 72.8
Samples: 2
Max nTPM: 89.7
Min nTPM: 55.9
RHH5243_R3615
89.7
RHH5272_R3644
55.9
Terminal effector memory CD8 T-cell nTPM: 124.4
Samples: 4
Max nTPM: 214.8
Min nTPM: 59.1
RHH5232_R3604
122.1
RHH5204_R3575
59.1
RHH5261_R3633
214.8
RHH5296_R3662
101.7
Vd2 gdTCR nTPM: 105.7
Samples: 4
Max nTPM: 168.3
Min nTPM: 59.2
RHH5234_R3606
75.4
RHH5206_R3577
119.9
RHH5263_R3635
168.3
RHH5298_R3664
59.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
