HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:10.0 nTPM
HPA Brain:83.2 nTPM
GTEx:10.0 nTPM
FANTOM5:60.3 Scaled Tags Per Million
Pig:45.6 nTPM
Mouse:29.6 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA063665
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 83.2
Sample id Sample description nTPM
Hippocampus
nTPM: 56.2
2529 Female, age 94, left hemisphere 70.3
1911 Female, age 85, right hemisphere 62.9
2621 Female, age 67, right hemisphere 61.4
2148 Female, age 91, left hemisphere 52.6
1898 Male, age 80, left hemisphere 46.2
1855 Male, age 76, left hemisphere 43.9
Dentate gyrus
nTPM: 58.5
2530 Female, age 94, left hemisphere 88.8
2528 Male, age 74, both hemispheres 63.0
2246 Female, age 85, both hemispheres 56.9
2010 Male, age 76, both hemispheres 56.3
2531 Female, age 67, both hemispheres 48.1
1927 Female, age 91, both hemispheres 38.0
Entorhinal gyrus
nTPM: 65.2
2117 Female, age 91, right hemisphere 99.0
2764 Male, age 80, right hemisphere 73.3
2686 Male, age 75, right hemisphere 61.9
2613 Female, age 94, left hemisphere 60.5
1938 Female, age 85, left hemisphere 48.8
1787 Male, age 76, left hemisphere 47.8
Hippocampus, CA1
nTPM: 44.8
2082 Female, age 91, right hemisphere 58.4
2527 Male, age 74, both hemispheres 57.1
1873 Female, age 85, both hemispheres 48.4
2749 Male, age 80, left hemisphere 35.2
2045 Male, age 76, both hemispheres 25.1
Hippocampus, CA2
nTPM: 59.6
1963 Male, age 80, left hemisphere 71.8
2437 Female, age 94, left hemisphere 68.1
1940 Female, age 85, left hemisphere 62.5
2113 Female, age 91, right hemisphere 62.3
2249 Male, age 74, both hemispheres 62.1
1892 Male, age 76, both hemispheres 30.6
Hippocampus, CA3
nTPM: 47.7
1891 Female, age 85, both hemispheres 84.2
1867 Male, age 76, both hemispheres 46.9
2436 Male, age 74, both hemispheres 46.1
2861 Female, age 67, both hemispheres 41.3
2620 Female, age 94, left hemisphere 34.6
2137 Male, age 80, left hemisphere 32.8
Parahippocampal cortex
nTPM: 57.0
2692 Male, age 74, both hemispheres 81.1
2532 Female, age 72, left hemisphere 71.7
1990 Female, age 91, right hemisphere 71.2
2018 Male, age 76, both hemispheres 54.1
1850 Male, age 80, both hemispheres 53.0
1933 Female, age 85, both hemispheres 51.4
2245 Female, age 91, both hemispheres 49.1
2622 Female, age 67, right hemisphere 48.1
2693 Female, age 94, both hemispheres 46.8
2250 Female, age 67, right hemisphere 43.0
Perirhinal gyrus
nTPM: 39.0
1847 Female, age 91, left hemisphere 41.1
2848 Male, age 76, right hemisphere 40.3
2521 Female, age 94, right hemisphere 39.6
1841 Female, age 85, right hemisphere 38.1
1794 Male, age 80, right hemisphere 35.8
Subiculum
nTPM: 83.2
2042 Male, age 76, both hemispheres 97.1
1901 Male, age 80, both hemispheres 93.6
2438 Female, age 94, left hemisphere 91.6
1977 Female, age 85, both hemispheres 78.7
2619 Male, age 74, both hemispheres 75.7
2729 Female, age 91, right hemisphere 62.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.0
Samples: 197

Max nTPM: 27.5
Min nTPM: 0.9
Std nTPM: 5.6
Median nTPM: 8.1
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 27.5
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 27.2
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 26.5
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 25.1
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 25.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 24.1
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 23.4
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 22.8
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 22.1
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 21.0
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 20.9
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 60.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 60.3
FF:10153-102I9 76 years, female 85.3
FF:10169-103B7 60 years, female 35.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 45.6
Pig sample Sample description nTPM
Subiculum
nTPM: 38.9
Samples: 4

Max nTPM: 44.0
Min nTPM: 35.9
Sample A Female 35.9
Sample B Female 44.0
Sample C Male 39.5
Sample D Male 36.3
Dorsal hippocampus
nTPM: 45.6
Samples: 4

Max nTPM: 56.1
Min nTPM: 33.2
Sample A Female 49.7
Sample B Female 43.3
Sample C Male 56.1
Sample D Male 33.2
Entorhinal cortex
nTPM: 34.2
Samples: 4

Max nTPM: 40.0
Min nTPM: 30.1
Sample A Female 30.1
Sample B Female 40.0
Sample C Male 34.1
Sample D Male 32.6
Ventral hippocampus
nTPM: 44.1
Samples: 4

Max nTPM: 46.8
Min nTPM: 41.5
Sample A Female 41.5
Sample B Female 42.8
Sample C Male 46.8
Sample D Male 45.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 29.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 26.4
Samples: 4

Max nTPM: 31.0
Min nTPM: 23.3
Sample A Male 31.0
Sample B Male 24.5
Sample C Female 26.9
Sample D Female 23.3
Hippocampal formation
nTPM: 29.6
Samples: 4

Max nTPM: 34.3
Min nTPM: 24.5
Sample A Male 24.5
Sample B Male 27.0
Sample C Female 34.3
Sample D Female 32.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
70194660 Antisense, RP_050517_01_H04, Mouse strain C57BL/6J (56 days, male) 0.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org