HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:21.6 nTPM
HPA Brain:94.1 nTPM
GTEx:21.6 nTPM
FANTOM5:78.6 Scaled Tags Per Million
Pig:27.8 nTPM
Mouse:59.1 nTPM
Allen mouse:17.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA017997Antibody HPA049019
Glial cells Not detectedNot detected
Neuronal cells MediumNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 94.1
Sample id Sample description nTPM
Hippocampus
nTPM: 74.7
2148 Female, age 91, left hemisphere 85.4
1898 Male, age 80, left hemisphere 82.6
1911 Female, age 85, right hemisphere 80.1
2621 Female, age 67, right hemisphere 71.3
2529 Female, age 94, left hemisphere 71.2
1855 Male, age 76, left hemisphere 57.7
Dentate gyrus
nTPM: 70.2
2531 Female, age 67, both hemispheres 90.6
1927 Female, age 91, both hemispheres 77.4
2246 Female, age 85, both hemispheres 69.3
2528 Male, age 74, both hemispheres 69.1
2530 Female, age 94, left hemisphere 59.0
2010 Male, age 76, both hemispheres 55.9
Entorhinal gyrus
nTPM: 72.5
2764 Male, age 80, right hemisphere 79.4
1787 Male, age 76, left hemisphere 77.1
2613 Female, age 94, left hemisphere 76.5
2686 Male, age 75, right hemisphere 70.2
1938 Female, age 85, left hemisphere 69.5
2117 Female, age 91, right hemisphere 62.4
Hippocampus, CA1
nTPM: 91.5
2749 Male, age 80, left hemisphere 150.5
2527 Male, age 74, both hemispheres 87.3
2082 Female, age 91, right hemisphere 76.7
2045 Male, age 76, both hemispheres 74.6
1873 Female, age 85, both hemispheres 68.5
Hippocampus, CA2
nTPM: 72.2
2113 Female, age 91, right hemisphere 78.7
1963 Male, age 80, left hemisphere 78.2
2437 Female, age 94, left hemisphere 76.4
2249 Male, age 74, both hemispheres 71.8
1892 Male, age 76, both hemispheres 69.4
1940 Female, age 85, left hemisphere 58.7
Hippocampus, CA3
nTPM: 94.1
2137 Male, age 80, left hemisphere 174.5
2861 Female, age 67, both hemispheres 96.7
2620 Female, age 94, left hemisphere 95.3
1867 Male, age 76, both hemispheres 67.9
2436 Male, age 74, both hemispheres 66.5
1891 Female, age 85, both hemispheres 63.6
Parahippocampal cortex
nTPM: 71.1
2245 Female, age 91, both hemispheres 102.1
2622 Female, age 67, right hemisphere 76.7
2250 Female, age 67, right hemisphere 75.6
2693 Female, age 94, both hemispheres 68.1
1990 Female, age 91, right hemisphere 67.8
1850 Male, age 80, both hemispheres 67.3
1933 Female, age 85, both hemispheres 65.5
2018 Male, age 76, both hemispheres 64.5
2692 Male, age 74, both hemispheres 61.7
2532 Female, age 72, left hemisphere 61.1
Perirhinal gyrus
nTPM: 75.6
1847 Female, age 91, left hemisphere 87.5
1794 Male, age 80, right hemisphere 80.0
2521 Female, age 94, right hemisphere 79.6
2848 Male, age 76, right hemisphere 69.7
1841 Female, age 85, right hemisphere 61.1
Subiculum
nTPM: 72.4
1901 Male, age 80, both hemispheres 96.4
2729 Female, age 91, right hemisphere 76.6
2619 Male, age 74, both hemispheres 72.5
2438 Female, age 94, left hemisphere 69.3
1977 Female, age 85, both hemispheres 65.3
2042 Male, age 76, both hemispheres 54.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.6
Samples: 197

Max nTPM: 46.6
Min nTPM: 4.9
Std nTPM: 8.0
Median nTPM: 21.0
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 46.6
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 43.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 42.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 41.4
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 40.7
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 40.7
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 40.7
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 38.9
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 37.9
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 37.6
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 37.2
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 78.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 78.6
FF:10153-102I9 76 years, female 81.4
FF:10169-103B7 60 years, female 75.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 27.8
Pig sample Sample description nTPM
Subiculum
nTPM: 27.8
Samples: 4

Max nTPM: 34.3
Min nTPM: 20.3
Sample A Female 34.3
Sample B Female 28.1
Sample C Male 28.4
Sample D Male 20.3
Dorsal hippocampus
nTPM: 19.4
Samples: 4

Max nTPM: 25.0
Min nTPM: 15.4
Sample A Female 20.5
Sample B Female 25.0
Sample C Male 15.4
Sample D Male 16.5
Entorhinal cortex
nTPM: 23.8
Samples: 4

Max nTPM: 29.1
Min nTPM: 21.0
Sample A Female 21.0
Sample B Female 22.0
Sample C Male 29.1
Sample D Male 23.0
Ventral hippocampus
nTPM: 23.5
Samples: 4

Max nTPM: 33.5
Min nTPM: 15.6
Sample A Female 15.6
Sample B Female 20.9
Sample C Male 33.5
Sample D Male 24.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 59.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 57.0
Samples: 4

Max nTPM: 61.5
Min nTPM: 51.8
Sample A Male 56.7
Sample B Male 57.8
Sample C Female 61.5
Sample D Female 51.8
Hippocampal formation
nTPM: 59.1
Samples: 4

Max nTPM: 66.0
Min nTPM: 54.6
Sample A Male 60.3
Sample B Male 66.0
Sample C Female 54.6
Sample D Female 55.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.4
71764449 Antisense, RP_050926_01_C01, Mouse strain C57BL/6J (56 days, male) 17.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org