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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
80.1
nTPM
GTEx:
80.1
nTPM
FANTOM5:
41.5
Scaled Tags Per Million
Pig:
24.1
nTPM
Mouse:
71.2
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
80.1
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 80.1
Samples: 105
Max nTPM: 105.4
Min nTPM: 44.8
Std nTPM: 10.3
Median nTPM:
352_1
62 years, male
105.4
6_1
73 years, female
105.0
229_1
69 years, female
104.2
316_1
62 years, male
100.6
172_1
72 years, female
99.4
35_1
74 years, female
97.9
375_1
74 years, female
96.7
142_1
61 years, female
96.0
237_1
82 years, male
96.0
389_1
86 years, female
94.5
347_1
72 years, male
93.9
32_1
67 years, male
93.7
153_1
70 years, female
91.3
379_1
60 years, male
90.7
425_1
59 years, female
90.7
217_1
76 years, male
90.6
405_1
91 years, male
89.2
319_1
81 years, male
89.0
415_1
77 years, female
88.8
137_1
83 years, male
88.5
386_1
76 years, male
88.2
218_1
71 years, female
88.1
243_1
75 years, male
88.1
396_1
62 years, male
88.1
354_1
81 years, female
87.9
117_1
61 years, male
86.9
335_1
73 years, female
86.9
115_1
83 years, male
86.2
490_1
67 years, female
85.7
162_1
79 years, female
85.6
466_1
57 years, female
85.6
139_1
64 years, female
85.2
324_1
76 years, male
85.2
81_1
67 years, male
84.9
163_1
78 years, male
84.5
126_1
63 years, male
84.2
468_1
89 years, male
84.1
376_1
75 years, female
83.9
406_1
79 years, male
82.3
189_1
76 years, male
82.2
503_1
68 years, male
82.0
9_1
66 years, female
81.8
246_1
77 years, male
81.8
286_1
68 years, female
81.5
447_1
81 years, male
81.5
321_1
62 years, female
81.3
320_1
89 years, female
81.2
18_1
88 years, male
80.7
43_1
64 years, female
80.7
177_1
74 years, male
80.4
349_1
83 years, male
80.4
394_1
75 years, female
80.1
266_1
85 years, male
79.9
318_1
68 years, male
79.9
42_1
85 years, male
79.8
404_1
82 years, female
79.5
517_1
88 years, male
79.5
322_1
76 years, male
79.2
17_1
71 years, male
78.8
109_1
81 years, female
78.3
414_1
84 years, female
78.0
145_1
84 years, male
77.7
291_1
76 years, male
77.4
526_1
61 years, male
77.2
413_1
59 years, female
76.5
518_1
75 years, female
76.4
355_1
70 years, female
76.3
480_1
63 years, male
76.0
313_1
79 years, female
75.7
348_1
84 years, male
75.3
292_1
71 years, male
74.5
2_1
77 years, female
74.4
350_1
84 years, female
74.4
149_1
88 years, male
74.0
499_1
55 years, female
73.8
265_1
87 years, male
73.7
351_1
91 years, male
73.6
377_1
82 years, female
73.3
307_1
66 years, female
73.0
119_1
70 years, female
72.8
384_1
83 years, male
72.6
99_1
64 years, male
72.5
120_1
70 years, female
72.0
353_1
82 years, female
71.8
173_1
67 years, male
71.6
251_1
78 years, male
71.3
356_1
87 years, female
71.0
288_1
66 years, female
70.0
311_1
78 years, male
69.4
264_1
73 years, female
69.3
491_1
89 years, female
69.1
89_1
63 years, male
68.1
317_1
60 years, male
68.1
315_1
62 years, female
67.9
4_1
88 years, female
67.5
254_1
77 years, female
67.5
501_1
88 years, male
67.3
314_1
67 years, male
66.9
495_1
57 years, female
63.7
506_1
65 years, male
63.4
293_1
68 years, female
63.3
295_1
61 years, female
63.1
452_1
88 years, female
63.1
41_1
94 years, female
62.6
308_1
70 years, female
44.8
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
