HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:21.3 nTPM
HPA Brain:24.1 nTPM
GTEx:21.3 nTPM
FANTOM5:11.3 Scaled Tags Per Million
Pig:38.5 nTPM
Mouse:5.4 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 24.1
Sample id Sample description nTPM
Hippocampus
nTPM: 21.4
2529 Female, age 94, left hemisphere 23.3
2621 Female, age 67, right hemisphere 21.7
1855 Male, age 76, left hemisphere 21.6
1911 Female, age 85, right hemisphere 21.1
1898 Male, age 80, left hemisphere 20.4
2148 Female, age 91, left hemisphere 20.4
Dentate gyrus
nTPM: 21.4
2010 Male, age 76, both hemispheres 24.5
2530 Female, age 94, left hemisphere 23.2
2528 Male, age 74, both hemispheres 21.3
2246 Female, age 85, both hemispheres 20.8
2531 Female, age 67, both hemispheres 19.5
1927 Female, age 91, both hemispheres 19.0
Entorhinal gyrus
nTPM: 24.1
1787 Male, age 76, left hemisphere 26.3
2613 Female, age 94, left hemisphere 25.9
1938 Female, age 85, left hemisphere 25.5
2117 Female, age 91, right hemisphere 24.8
2764 Male, age 80, right hemisphere 21.7
2686 Male, age 75, right hemisphere 20.5
Hippocampus, CA1
nTPM: 21.7
2527 Male, age 74, both hemispheres 22.9
1873 Female, age 85, both hemispheres 22.7
2082 Female, age 91, right hemisphere 21.7
2749 Male, age 80, left hemisphere 20.9
2045 Male, age 76, both hemispheres 20.5
Hippocampus, CA2
nTPM: 22.4
1940 Female, age 85, left hemisphere 24.5
2437 Female, age 94, left hemisphere 23.7
2113 Female, age 91, right hemisphere 22.6
2249 Male, age 74, both hemispheres 22.3
1892 Male, age 76, both hemispheres 20.8
1963 Male, age 80, left hemisphere 20.5
Hippocampus, CA3
nTPM: 20.3
2436 Male, age 74, both hemispheres 21.8
1891 Female, age 85, both hemispheres 21.5
2861 Female, age 67, both hemispheres 21.3
1867 Male, age 76, both hemispheres 19.6
2620 Female, age 94, left hemisphere 19.2
2137 Male, age 80, left hemisphere 18.4
Parahippocampal cortex
nTPM: 23.4
2018 Male, age 76, both hemispheres 27.2
1933 Female, age 85, both hemispheres 25.0
2250 Female, age 67, right hemisphere 24.6
1990 Female, age 91, right hemisphere 24.3
2532 Female, age 72, left hemisphere 23.6
1850 Male, age 80, both hemispheres 22.4
2692 Male, age 74, both hemispheres 21.9
2622 Female, age 67, right hemisphere 21.7
2245 Female, age 91, both hemispheres 21.6
2693 Female, age 94, both hemispheres 21.4
Perirhinal gyrus
nTPM: 23.0
1847 Female, age 91, left hemisphere 25.4
1794 Male, age 80, right hemisphere 23.9
2848 Male, age 76, right hemisphere 22.9
2521 Female, age 94, right hemisphere 21.6
1841 Female, age 85, right hemisphere 21.3
Subiculum
nTPM: 20.7
2042 Male, age 76, both hemispheres 23.7
1901 Male, age 80, both hemispheres 21.5
1977 Female, age 85, both hemispheres 21.3
2729 Female, age 91, right hemisphere 20.9
2619 Male, age 74, both hemispheres 19.5
2438 Female, age 94, left hemisphere 17.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.3
Samples: 197

Max nTPM: 38.8
Min nTPM: 13.3
Std nTPM: 3.6
Median nTPM: 20.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 38.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 32.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 30.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 30.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 30.3
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 29.1
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 28.6
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 28.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 27.7
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 27.6
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 27.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 11.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 11.3
FF:10169-103B7 60 years, female 11.4
FF:10153-102I9 76 years, female 11.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 38.5
Pig sample Sample description nTPM
Subiculum
nTPM: 32.2
Samples: 4

Max nTPM: 37.4
Min nTPM: 28.4
Sample A Female 37.4
Sample B Female 32.8
Sample C Male 30.1
Sample D Male 28.4
Dorsal hippocampus
nTPM: 33.6
Samples: 4

Max nTPM: 40.7
Min nTPM: 26.2
Sample A Female 40.7
Sample B Female 34.6
Sample C Male 33.0
Sample D Male 26.2
Entorhinal cortex
nTPM: 38.5
Samples: 4

Max nTPM: 49.4
Min nTPM: 29.6
Sample A Female 29.6
Sample B Female 49.4
Sample C Male 42.0
Sample D Male 33.0
Ventral hippocampus
nTPM: 32.0
Samples: 4

Max nTPM: 38.5
Min nTPM: 25.1
Sample A Female 28.5
Sample B Female 25.1
Sample C Male 38.5
Sample D Male 35.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 5.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 4.6
Samples: 4

Max nTPM: 5.7
Min nTPM: 3.6
Sample A Male 5.7
Sample B Male 3.6
Sample C Female 4.7
Sample D Female 4.3
Hippocampal formation
nTPM: 5.4
Samples: 4

Max nTPM: 5.7
Min nTPM: 5.2
Sample A Male 5.5
Sample B Male 5.2
Sample C Female 5.2
Sample D Female 5.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
71529929 Antisense, RP_050915_01_C12, Mouse strain C57BL/6J (56 days, male) 0.0

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