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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
224.4
nTPM
Monaco:
109.5
nTPM
Schmiedel:
57.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
224.4
HPA sample
nTPM
gdT-cell nTPM: 146.5
Samples: 6
Max nTPM: 177.1
Min nTPM: 107.9
P10809_1007
109.3
P10809_1022
159.7
P10809_1041
155.4
P10809_1060
107.9
P10809_1077
169.6
P10809_1098
177.1
MAIT T-cell nTPM: 188.0
Samples: 6
Max nTPM: 226.1
Min nTPM: 109.5
P10809_1006
109.5
P10809_1024
226.1
P10809_1043
186.4
P10809_1062
174.5
P10809_1083
209.2
P10809_1097
222.4
Memory CD4 T-cell nTPM: 150.8
Samples: 6
Max nTPM: 181.9
Min nTPM: 107.9
P10809_1014
107.9
P10809_1026
147.5
P10809_1045
136.2
P10809_1064
160.4
P10809_1086
181.9
P10809_1113
171.0
Memory CD8 T-cell nTPM: 142.6
Samples: 5
Max nTPM: 169.0
Min nTPM: 96.2
P10809_1012
96.2
P10809_1027
169.0
P10809_1046
155.3
P10809_1065
134.7
P10809_1111
157.6
Naive CD4 T-cell nTPM: 77.9
Samples: 6
Max nTPM: 87.2
Min nTPM: 64.2
P10809_1015
64.2
P10809_1030
77.7
P10809_1049
82.7
P10809_1068
79.6
P10809_1085
87.2
P10809_1112
76.1
Naive CD8 T-cell nTPM: 105.7
Samples: 6
Max nTPM: 187.9
Min nTPM: 55.0
P10809_1016
55.0
P10809_1031
83.5
P10809_1050
97.5
P10809_1069
114.7
P10809_1087
187.9
P10809_1110
95.6
T-reg nTPM: 224.4
Samples: 6
Max nTPM: 271.7
Min nTPM: 132.4
P10809_1018
132.4
P10809_1037
271.7
P10809_1056
208.7
P10809_1075
267.8
P10809_1094
226.3
P10809_1106
239.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
109.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 63.5
Samples: 4
Max nTPM: 88.5
Min nTPM: 39.4
RHH5202_R3573
39.4
RHH5230_R3602
63.0
RHH5259_R3631
63.0
RHH5288_R3660
88.5
Effector memory CD8 T-cell nTPM: 56.4
Samples: 4
Max nTPM: 70.7
Min nTPM: 42.1
RHH5203_R3574
61.0
RHH5231_R3603
51.6
RHH5260_R3632
70.7
RHH5289_R3661
42.1
MAIT T-cell nTPM: 91.5
Samples: 4
Max nTPM: 121.8
Min nTPM: 70.2
RHH5233_R3605
90.2
RHH5205_R3576
70.2
RHH5262_R3634
83.6
RHH5297_R3663
121.8
Memory CD4 T-cell TFH nTPM: 76.4
Samples: 4
Max nTPM: 103.7
Min nTPM: 56.2
RHH5300_R3666
74.2
RHH5236_R3608
103.7
RHH5265_R3637
56.2
RHH5208_R3579
71.5
Memory CD4 T-cell Th1 nTPM: 75.0
Samples: 4
Max nTPM: 130.3
Min nTPM: 40.7
RHH5210_R3581
40.7
RHH5302_R3668
130.3
RHH5238_R3610
48.7
RHH5267_R3639
80.2
Memory CD4 T-cell Th1/Th17 nTPM: 81.3
Samples: 4
Max nTPM: 116.7
Min nTPM: 53.4
RHH5303_R3669
116.7
RHH5211_R3582
84.2
RHH5239_R3611
53.4
RHH5268_R3640
70.9
Memory CD4 T-cell Th17 nTPM: 67.3
Samples: 4
Max nTPM: 78.7
Min nTPM: 55.1
RHH5304_R3670
78.7
RHH5212_R3583
75.2
RHH5240_R3612
60.2
RHH5269_R3641
55.1
Memory CD4 T-cell Th2 nTPM: 90.9
Samples: 4
Max nTPM: 111.3
Min nTPM: 68.0
RHH5305_R3671
96.1
RHH5213_R3584
88.0
RHH5241_R3613
111.3
RHH5270_R3642
68.0
Naive CD4 T-cell nTPM: 37.4
Samples: 4
Max nTPM: 42.8
Min nTPM: 32.1
RHH5306_R3672
42.8
RHH5214_R3585
33.1
RHH5242_R3614
41.4
RHH5271_R3643
32.1
Naive CD8 T-cell nTPM: 30.7
Samples: 4
Max nTPM: 35.3
Min nTPM: 28.4
RHH5201_R3572
30.0
RHH5229_R3601
35.3
RHH5258_R3630
28.4
RHH5287_R3659
29.1
Non-Vd2 gdTCR nTPM: 64.1
Samples: 4
Max nTPM: 94.4
Min nTPM: 42.2
RHH5235_R3607
42.2
RHH5264_R3636
60.3
RHH5207_R3578
59.6
RHH5299_R3665
94.4
T-reg nTPM: 86.5
Samples: 4
Max nTPM: 117.3
Min nTPM: 64.2
RHH5301_R3667
117.3
RHH5237_R3609
91.5
RHH5266_R3638
72.9
RHH5209_R3580
64.2
Terminal effector memory CD4 T-cell nTPM: 59.0
Samples: 2
Max nTPM: 77.7
Min nTPM: 40.3
RHH5243_R3615
40.3
RHH5272_R3644
77.7
Terminal effector memory CD8 T-cell nTPM: 93.3
Samples: 4
Max nTPM: 154.0
Min nTPM: 40.9
RHH5232_R3604
40.9
RHH5204_R3575
154.0
RHH5261_R3633
89.5
RHH5296_R3662
88.9
Vd2 gdTCR nTPM: 109.5
Samples: 4
Max nTPM: 156.2
Min nTPM: 60.3
RHH5234_R3606
60.3
RHH5206_R3577
156.2
RHH5263_R3635
75.4
RHH5298_R3664
146.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
