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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
271.0
nTPM
Monaco:
55.1
nTPM
Schmiedel:
259.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
271.0
HPA sample
nTPM
gdT-cell nTPM: 170.4
Samples: 6
Max nTPM: 230.9
Min nTPM: 120.3
P10809_1007
120.3
P10809_1022
177.0
P10809_1041
230.9
P10809_1060
156.9
P10809_1077
158.4
P10809_1098
179.0
MAIT T-cell nTPM: 168.3
Samples: 6
Max nTPM: 222.1
Min nTPM: 91.0
P10809_1006
91.0
P10809_1024
190.4
P10809_1043
193.0
P10809_1062
158.9
P10809_1083
154.3
P10809_1097
222.1
Memory CD4 T-cell nTPM: 180.8
Samples: 6
Max nTPM: 248.6
Min nTPM: 118.9
P10809_1014
118.9
P10809_1026
248.6
P10809_1045
174.8
P10809_1064
193.7
P10809_1086
169.3
P10809_1113
179.5
Memory CD8 T-cell nTPM: 186.2
Samples: 5
Max nTPM: 226.4
Min nTPM: 122.1
P10809_1012
122.1
P10809_1027
226.4
P10809_1046
208.7
P10809_1065
182.6
P10809_1111
191.3
Naive CD4 T-cell nTPM: 143.3
Samples: 6
Max nTPM: 195.6
Min nTPM: 86.9
P10809_1015
86.9
P10809_1030
145.8
P10809_1049
195.6
P10809_1068
145.7
P10809_1085
141.9
P10809_1112
144.0
Naive CD8 T-cell nTPM: 159.6
Samples: 6
Max nTPM: 177.1
Min nTPM: 107.4
P10809_1016
107.4
P10809_1031
173.9
P10809_1050
172.8
P10809_1069
177.1
P10809_1087
176.7
P10809_1110
149.8
T-reg nTPM: 270.9
Samples: 6
Max nTPM: 379.8
Min nTPM: 150.1
P10809_1018
150.1
P10809_1037
314.1
P10809_1056
379.8
P10809_1075
258.3
P10809_1094
269.1
P10809_1106
254.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
55.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 38.1
Samples: 4
Max nTPM: 46.7
Min nTPM: 29.6
RHH5202_R3573
36.0
RHH5230_R3602
29.6
RHH5259_R3631
40.2
RHH5288_R3660
46.7
Effector memory CD8 T-cell nTPM: 37.4
Samples: 4
Max nTPM: 48.5
Min nTPM: 25.3
RHH5203_R3574
48.5
RHH5231_R3603
38.2
RHH5260_R3632
37.6
RHH5289_R3661
25.3
MAIT T-cell nTPM: 32.1
Samples: 4
Max nTPM: 59.3
Min nTPM: 17.9
RHH5233_R3605
22.0
RHH5205_R3576
17.9
RHH5262_R3634
29.3
RHH5297_R3663
59.3
Memory CD4 T-cell TFH nTPM: 25.6
Samples: 4
Max nTPM: 39.1
Min nTPM: 16.7
RHH5300_R3666
16.7
RHH5236_R3608
39.1
RHH5265_R3637
23.3
RHH5208_R3579
23.3
Memory CD4 T-cell Th1 nTPM: 40.4
Samples: 4
Max nTPM: 53.9
Min nTPM: 29.7
RHH5210_R3581
29.7
RHH5302_R3668
53.9
RHH5238_R3610
43.7
RHH5267_R3639
34.4
Memory CD4 T-cell Th1/Th17 nTPM: 30.1
Samples: 4
Max nTPM: 36.4
Min nTPM: 21.0
RHH5303_R3669
28.0
RHH5211_R3582
21.0
RHH5239_R3611
34.8
RHH5268_R3640
36.4
Memory CD4 T-cell Th17 nTPM: 33.3
Samples: 4
Max nTPM: 52.5
Min nTPM: 18.4
RHH5304_R3670
18.4
RHH5212_R3583
29.5
RHH5240_R3612
52.5
RHH5269_R3641
32.7
Memory CD4 T-cell Th2 nTPM: 36.5
Samples: 4
Max nTPM: 42.9
Min nTPM: 31.8
RHH5305_R3671
42.9
RHH5213_R3584
31.8
RHH5241_R3613
35.3
RHH5270_R3642
36.0
Naive CD4 T-cell nTPM: 19.6
Samples: 4
Max nTPM: 29.1
Min nTPM: 9.9
RHH5306_R3672
29.1
RHH5214_R3585
20.6
RHH5242_R3614
18.7
RHH5271_R3643
9.9
Naive CD8 T-cell nTPM: 26.7
Samples: 4
Max nTPM: 35.7
Min nTPM: 12.5
RHH5201_R3572
27.4
RHH5229_R3601
12.5
RHH5258_R3630
35.7
RHH5287_R3659
31.0
Non-Vd2 gdTCR nTPM: 46.7
Samples: 4
Max nTPM: 79.5
Min nTPM: 28.5
RHH5235_R3607
31.3
RHH5264_R3636
47.6
RHH5207_R3578
28.5
RHH5299_R3665
79.5
T-reg nTPM: 44.1
Samples: 4
Max nTPM: 55.9
Min nTPM: 32.8
RHH5301_R3667
55.9
RHH5237_R3609
44.2
RHH5266_R3638
43.3
RHH5209_R3580
32.8
Terminal effector memory CD4 T-cell nTPM: 27.3
Samples: 2
Max nTPM: 27.6
Min nTPM: 26.9
RHH5243_R3615
26.9
RHH5272_R3644
27.6
Terminal effector memory CD8 T-cell nTPM: 55.1
Samples: 4
Max nTPM: 84.5
Min nTPM: 31.7
RHH5232_R3604
31.7
RHH5204_R3575
84.5
RHH5261_R3633
44.7
RHH5296_R3662
59.6
Vd2 gdTCR nTPM: 45.6
Samples: 4
Max nTPM: 54.6
Min nTPM: 33.0
RHH5234_R3606
40.6
RHH5206_R3577
54.6
RHH5263_R3635
33.0
RHH5298_R3664
54.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
