HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:139.6 nTPM
HPA Brain:128.9 nTPM
GTEx:139.6 nTPM
FANTOM5:315.0 Scaled Tags Per Million
Pig:123.1 nTPM
Mouse:227.0 nTPM
Allen mouse:19.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003901Antibody HPA008424Antibody CAB005224
Glial cells HighMediumHigh
Neuronal cells HighHighHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 128.9
Sample id Sample description nTPM
Hippocampus
nTPM: 127.1
1898 Male, age 80, left hemisphere 158.4
2529 Female, age 94, left hemisphere 135.3
2621 Female, age 67, right hemisphere 134.8
1911 Female, age 85, right hemisphere 123.1
1855 Male, age 76, left hemisphere 109.5
2148 Female, age 91, left hemisphere 101.7
Dentate gyrus
nTPM: 126.2
2010 Male, age 76, both hemispheres 169.2
2530 Female, age 94, left hemisphere 128.9
2246 Female, age 85, both hemispheres 128.5
1927 Female, age 91, both hemispheres 125.1
2528 Male, age 74, both hemispheres 103.5
2531 Female, age 67, both hemispheres 102.1
Entorhinal gyrus
nTPM: 102.2
1938 Female, age 85, left hemisphere 141.0
2117 Female, age 91, right hemisphere 117.5
1787 Male, age 76, left hemisphere 111.8
2764 Male, age 80, right hemisphere 95.5
2686 Male, age 75, right hemisphere 84.6
2613 Female, age 94, left hemisphere 63.0
Hippocampus, CA1
nTPM: 128.9
2045 Male, age 76, both hemispheres 164.2
1873 Female, age 85, both hemispheres 149.5
2749 Male, age 80, left hemisphere 121.1
2527 Male, age 74, both hemispheres 115.2
2082 Female, age 91, right hemisphere 94.5
Hippocampus, CA2
nTPM: 127.1
2249 Male, age 74, both hemispheres 169.0
1892 Male, age 76, both hemispheres 136.6
1940 Female, age 85, left hemisphere 136.0
1963 Male, age 80, left hemisphere 120.7
2437 Female, age 94, left hemisphere 104.2
2113 Female, age 91, right hemisphere 96.2
Hippocampus, CA3
nTPM: 120.1
1867 Male, age 76, both hemispheres 169.2
2436 Male, age 74, both hemispheres 161.4
1891 Female, age 85, both hemispheres 124.8
2137 Male, age 80, left hemisphere 102.8
2861 Female, age 67, both hemispheres 82.2
2620 Female, age 94, left hemisphere 80.4
Parahippocampal cortex
nTPM: 110.4
2018 Male, age 76, both hemispheres 147.0
2250 Female, age 67, right hemisphere 132.4
1933 Female, age 85, both hemispheres 129.3
2245 Female, age 91, both hemispheres 119.9
1850 Male, age 80, both hemispheres 119.7
1990 Female, age 91, right hemisphere 112.9
2532 Female, age 72, left hemisphere 105.3
2692 Male, age 74, both hemispheres 84.0
2693 Female, age 94, both hemispheres 78.9
2622 Female, age 67, right hemisphere 74.5
Perirhinal gyrus
nTPM: 126.1
1841 Female, age 85, right hemisphere 167.7
1847 Female, age 91, left hemisphere 126.0
2848 Male, age 76, right hemisphere 115.4
1794 Male, age 80, right hemisphere 110.8
2521 Female, age 94, right hemisphere 110.8
Subiculum
nTPM: 118.6
2042 Male, age 76, both hemispheres 143.2
2438 Female, age 94, left hemisphere 130.3
1977 Female, age 85, both hemispheres 127.5
1901 Male, age 80, both hemispheres 119.4
2729 Female, age 91, right hemisphere 99.7
2619 Male, age 74, both hemispheres 91.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 139.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 139.6
Samples: 197

Max nTPM: 542.4
Min nTPM: 72.9
Std nTPM: 56.6
Median nTPM: 126.7
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 542.4
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 442.9
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 369.8
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 362.4
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 310.6
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 283.7
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 282.1
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 280.7
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 270.4
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 246.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 245.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 315.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 315.0
FF:10169-103B7 60 years, female 360.3
FF:10153-102I9 76 years, female 269.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 123.1
Pig sample Sample description nTPM
Subiculum
nTPM: 116.7
Samples: 4

Max nTPM: 139.8
Min nTPM: 99.8
Sample A Female 139.8
Sample B Female 103.5
Sample C Male 99.8
Sample D Male 123.7
Dorsal hippocampus
nTPM: 121.1
Samples: 4

Max nTPM: 138.9
Min nTPM: 104.0
Sample A Female 138.9
Sample B Female 121.6
Sample C Male 119.7
Sample D Male 104.0
Entorhinal cortex
nTPM: 123.1
Samples: 4

Max nTPM: 138.3
Min nTPM: 115.0
Sample A Female 138.3
Sample B Female 123.0
Sample C Male 116.0
Sample D Male 115.0
Ventral hippocampus
nTPM: 111.3
Samples: 4

Max nTPM: 129.5
Min nTPM: 94.6
Sample A Female 122.9
Sample B Female 94.6
Sample C Male 98.2
Sample D Male 129.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 227.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 227.0
Samples: 4

Max nTPM: 238.9
Min nTPM: 211.5
Sample A Male 211.5
Sample B Male 222.6
Sample C Female 235.0
Sample D Female 238.9
Hippocampal formation
nTPM: 215.6
Samples: 4

Max nTPM: 238.4
Min nTPM: 195.8
Sample A Male 195.8
Sample B Male 211.8
Sample C Female 216.3
Sample D Female 238.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 19.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 19.0
79393537 Antisense, RP_071018_02_B03, Mouse strain C57BL/6J (56 days, male) 19.4
75042251 Antisense, RP_060412_02_C05, Mouse strain C57BL/6J (56 days, male) 18.5

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