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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
245.2
nTPM
Monaco:
493.4
nTPM
Schmiedel:
1160.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
245.2
HPA sample
nTPM
gdT-cell nTPM: 200.1
Samples: 6
Max nTPM: 259.4
Min nTPM: 137.0
P10809_1007
167.2
P10809_1022
259.4
P10809_1041
237.1
P10809_1060
137.0
P10809_1077
172.3
P10809_1098
227.6
MAIT T-cell nTPM: 245.3
Samples: 6
Max nTPM: 326.0
Min nTPM: 155.7
P10809_1006
226.2
P10809_1024
305.6
P10809_1043
253.3
P10809_1062
155.7
P10809_1083
204.7
P10809_1097
326.0
Memory CD4 T-cell nTPM: 118.8
Samples: 6
Max nTPM: 160.8
Min nTPM: 88.8
P10809_1014
119.1
P10809_1026
92.9
P10809_1045
136.2
P10809_1064
88.8
P10809_1086
160.8
P10809_1113
115.0
Memory CD8 T-cell nTPM: 187.8
Samples: 5
Max nTPM: 235.7
Min nTPM: 129.5
P10809_1012
155.6
P10809_1027
200.5
P10809_1046
235.7
P10809_1065
129.5
P10809_1111
217.9
Naive CD4 T-cell nTPM: 76.1
Samples: 6
Max nTPM: 108.3
Min nTPM: 45.0
P10809_1015
84.4
P10809_1030
84.5
P10809_1049
62.2
P10809_1068
45.0
P10809_1085
108.3
P10809_1112
72.0
Naive CD8 T-cell nTPM: 134.2
Samples: 6
Max nTPM: 221.7
Min nTPM: 84.8
P10809_1016
84.8
P10809_1031
120.3
P10809_1050
161.4
P10809_1069
100.5
P10809_1087
221.7
P10809_1110
116.2
T-reg nTPM: 81.3
Samples: 6
Max nTPM: 102.3
Min nTPM: 47.5
P10809_1018
89.1
P10809_1037
97.3
P10809_1056
78.0
P10809_1075
47.5
P10809_1094
73.4
P10809_1106
102.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
493.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 380.1
Samples: 4
Max nTPM: 509.5
Min nTPM: 281.1
RHH5202_R3573
281.1
RHH5230_R3602
509.5
RHH5259_R3631
415.8
RHH5288_R3660
314.1
Effector memory CD8 T-cell nTPM: 491.7
Samples: 4
Max nTPM: 557.4
Min nTPM: 373.5
RHH5203_R3574
373.5
RHH5231_R3603
517.5
RHH5260_R3632
557.4
RHH5289_R3661
518.2
MAIT T-cell nTPM: 447.7
Samples: 4
Max nTPM: 486.1
Min nTPM: 385.3
RHH5233_R3605
463.7
RHH5205_R3576
455.6
RHH5262_R3634
486.1
RHH5297_R3663
385.3
Memory CD4 T-cell TFH nTPM: 225.4
Samples: 4
Max nTPM: 270.8
Min nTPM: 146.9
RHH5300_R3666
238.2
RHH5236_R3608
270.8
RHH5265_R3637
245.7
RHH5208_R3579
146.9
Memory CD4 T-cell Th1 nTPM: 290.1
Samples: 4
Max nTPM: 341.4
Min nTPM: 238.1
RHH5210_R3581
238.1
RHH5302_R3668
272.9
RHH5238_R3610
341.4
RHH5267_R3639
308.0
Memory CD4 T-cell Th1/Th17 nTPM: 365.7
Samples: 4
Max nTPM: 409.9
Min nTPM: 308.4
RHH5303_R3669
375.2
RHH5211_R3582
308.4
RHH5239_R3611
409.9
RHH5268_R3640
369.1
Memory CD4 T-cell Th17 nTPM: 352.2
Samples: 4
Max nTPM: 436.1
Min nTPM: 260.9
RHH5304_R3670
411.1
RHH5212_R3583
260.9
RHH5240_R3612
436.1
RHH5269_R3641
300.6
Memory CD4 T-cell Th2 nTPM: 356.3
Samples: 4
Max nTPM: 385.5
Min nTPM: 318.9
RHH5305_R3671
338.0
RHH5213_R3584
385.5
RHH5241_R3613
382.7
RHH5270_R3642
318.9
Naive CD4 T-cell nTPM: 228.7
Samples: 4
Max nTPM: 252.7
Min nTPM: 204.0
RHH5306_R3672
252.7
RHH5214_R3585
226.2
RHH5242_R3614
231.7
RHH5271_R3643
204.0
Naive CD8 T-cell nTPM: 257.2
Samples: 4
Max nTPM: 334.6
Min nTPM: 211.8
RHH5201_R3572
211.8
RHH5229_R3601
334.6
RHH5258_R3630
242.4
RHH5287_R3659
239.9
Non-Vd2 gdTCR nTPM: 493.4
Samples: 4
Max nTPM: 574.6
Min nTPM: 371.7
RHH5235_R3607
574.6
RHH5264_R3636
570.2
RHH5207_R3578
457.0
RHH5299_R3665
371.7
T-reg nTPM: 257.5
Samples: 4
Max nTPM: 287.4
Min nTPM: 237.5
RHH5301_R3667
238.9
RHH5237_R3609
287.4
RHH5266_R3638
237.5
RHH5209_R3580
266.1
Terminal effector memory CD4 T-cell nTPM: 446.0
Samples: 2
Max nTPM: 474.3
Min nTPM: 417.6
RHH5243_R3615
474.3
RHH5272_R3644
417.6
Terminal effector memory CD8 T-cell nTPM: 489.2
Samples: 4
Max nTPM: 673.8
Min nTPM: 342.2
RHH5232_R3604
489.7
RHH5204_R3575
342.2
RHH5261_R3633
673.8
RHH5296_R3662
451.2
Vd2 gdTCR nTPM: 484.1
Samples: 4
Max nTPM: 631.0
Min nTPM: 359.9
RHH5234_R3606
464.7
RHH5206_R3577
480.6
RHH5263_R3635
631.0
RHH5298_R3664
359.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.