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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
67.3
nTPM
Monaco:
138.0
nTPM
Schmiedel:
36.7
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
67.3
HPA sample
nTPM
gdT-cell nTPM: 45.3
Samples: 6
Max nTPM: 57.1
Min nTPM: 35.4
P10809_1007
35.4
P10809_1022
57.1
P10809_1041
45.7
P10809_1060
39.6
P10809_1077
40.8
P10809_1098
53.1
MAIT T-cell nTPM: 49.6
Samples: 6
Max nTPM: 67.0
Min nTPM: 42.5
P10809_1006
43.1
P10809_1024
67.0
P10809_1043
55.7
P10809_1062
43.3
P10809_1083
46.2
P10809_1097
42.5
Memory CD4 T-cell nTPM: 51.5
Samples: 6
Max nTPM: 61.4
Min nTPM: 39.9
P10809_1014
48.2
P10809_1026
60.0
P10809_1045
61.4
P10809_1064
39.9
P10809_1086
49.4
P10809_1113
50.1
Memory CD8 T-cell nTPM: 48.4
Samples: 5
Max nTPM: 56.7
Min nTPM: 43.7
P10809_1012
48.4
P10809_1027
49.1
P10809_1046
56.7
P10809_1065
43.9
P10809_1111
43.7
Naive CD4 T-cell nTPM: 67.3
Samples: 6
Max nTPM: 86.1
Min nTPM: 52.4
P10809_1015
52.4
P10809_1030
69.3
P10809_1049
86.1
P10809_1068
64.0
P10809_1085
64.2
P10809_1112
68.0
Naive CD8 T-cell nTPM: 52.7
Samples: 6
Max nTPM: 65.2
Min nTPM: 36.8
P10809_1016
65.2
P10809_1031
36.8
P10809_1050
55.8
P10809_1069
54.7
P10809_1087
40.2
P10809_1110
63.6
T-reg nTPM: 55.6
Samples: 6
Max nTPM: 71.3
Min nTPM: 42.7
P10809_1018
42.7
P10809_1037
71.3
P10809_1056
65.5
P10809_1075
50.3
P10809_1094
57.9
P10809_1106
45.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
138.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 111.4
Samples: 4
Max nTPM: 149.3
Min nTPM: 94.1
RHH5202_R3573
149.3
RHH5230_R3602
107.0
RHH5259_R3631
94.1
RHH5288_R3660
95.0
Effector memory CD8 T-cell nTPM: 112.1
Samples: 4
Max nTPM: 132.1
Min nTPM: 98.0
RHH5203_R3574
101.2
RHH5231_R3603
132.1
RHH5260_R3632
98.0
RHH5289_R3661
116.9
MAIT T-cell nTPM: 117.4
Samples: 4
Max nTPM: 126.5
Min nTPM: 109.9
RHH5233_R3605
111.7
RHH5205_R3576
121.6
RHH5262_R3634
126.5
RHH5297_R3663
109.9
Memory CD4 T-cell TFH nTPM: 116.2
Samples: 4
Max nTPM: 129.6
Min nTPM: 101.1
RHH5300_R3666
101.1
RHH5236_R3608
122.2
RHH5265_R3637
112.0
RHH5208_R3579
129.6
Memory CD4 T-cell Th1 nTPM: 99.1
Samples: 4
Max nTPM: 112.2
Min nTPM: 70.0
RHH5210_R3581
112.2
RHH5302_R3668
104.2
RHH5238_R3610
70.0
RHH5267_R3639
110.0
Memory CD4 T-cell Th1/Th17 nTPM: 115.4
Samples: 4
Max nTPM: 125.9
Min nTPM: 108.9
RHH5303_R3669
125.9
RHH5211_R3582
109.5
RHH5239_R3611
108.9
RHH5268_R3640
117.4
Memory CD4 T-cell Th17 nTPM: 121.9
Samples: 4
Max nTPM: 155.7
Min nTPM: 90.2
RHH5304_R3670
114.7
RHH5212_R3583
90.2
RHH5240_R3612
155.7
RHH5269_R3641
127.0
Memory CD4 T-cell Th2 nTPM: 119.3
Samples: 4
Max nTPM: 129.8
Min nTPM: 108.2
RHH5305_R3671
117.5
RHH5213_R3584
121.7
RHH5241_R3613
129.8
RHH5270_R3642
108.2
Naive CD4 T-cell nTPM: 138.0
Samples: 4
Max nTPM: 171.1
Min nTPM: 105.3
RHH5306_R3672
132.5
RHH5214_R3585
143.0
RHH5242_R3614
105.3
RHH5271_R3643
171.1
Naive CD8 T-cell nTPM: 135.1
Samples: 4
Max nTPM: 164.5
Min nTPM: 107.9
RHH5201_R3572
164.5
RHH5229_R3601
107.9
RHH5258_R3630
149.8
RHH5287_R3659
118.3
Non-Vd2 gdTCR nTPM: 99.5
Samples: 4
Max nTPM: 104.9
Min nTPM: 93.7
RHH5235_R3607
93.7
RHH5264_R3636
101.2
RHH5207_R3578
104.9
RHH5299_R3665
98.2
T-reg nTPM: 121.1
Samples: 4
Max nTPM: 142.1
Min nTPM: 96.0
RHH5301_R3667
106.0
RHH5237_R3609
142.1
RHH5266_R3638
140.1
RHH5209_R3580
96.0
Terminal effector memory CD4 T-cell nTPM: 114.8
Samples: 2
Max nTPM: 115.4
Min nTPM: 114.1
RHH5243_R3615
114.1
RHH5272_R3644
115.4
Terminal effector memory CD8 T-cell nTPM: 103.7
Samples: 4
Max nTPM: 123.7
Min nTPM: 82.9
RHH5232_R3604
106.0
RHH5204_R3575
82.9
RHH5261_R3633
123.7
RHH5296_R3662
102.0
Vd2 gdTCR nTPM: 115.8
Samples: 4
Max nTPM: 130.1
Min nTPM: 99.3
RHH5234_R3606
128.4
RHH5206_R3577
99.3
RHH5263_R3635
130.1
RHH5298_R3664
105.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
