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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
69.0
nTPM
Monaco:
235.8
nTPM
Schmiedel:
280.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
69.0
HPA sample
nTPM
gdT-cell nTPM: 24.7
Samples: 6
Max nTPM: 30.6
Min nTPM: 13.7
P10809_1007
26.3
P10809_1022
29.6
P10809_1041
13.7
P10809_1060
30.6
P10809_1077
25.8
P10809_1098
22.3
MAIT T-cell nTPM: 30.7
Samples: 6
Max nTPM: 39.9
Min nTPM: 17.5
P10809_1006
39.1
P10809_1024
26.8
P10809_1043
17.5
P10809_1062
38.7
P10809_1083
39.9
P10809_1097
22.0
Memory CD4 T-cell nTPM: 30.8
Samples: 6
Max nTPM: 37.7
Min nTPM: 27.0
P10809_1014
27.9
P10809_1026
37.7
P10809_1045
27.0
P10809_1064
27.1
P10809_1086
30.0
P10809_1113
35.2
Memory CD8 T-cell nTPM: 28.9
Samples: 5
Max nTPM: 34.8
Min nTPM: 21.2
P10809_1012
31.1
P10809_1027
34.8
P10809_1046
21.2
P10809_1065
25.6
P10809_1111
31.7
Naive CD4 T-cell nTPM: 37.6
Samples: 6
Max nTPM: 54.3
Min nTPM: 26.0
P10809_1015
35.0
P10809_1030
37.7
P10809_1049
26.0
P10809_1068
54.3
P10809_1085
37.1
P10809_1112
35.2
Naive CD8 T-cell nTPM: 31.3
Samples: 6
Max nTPM: 37.6
Min nTPM: 26.4
P10809_1016
37.6
P10809_1031
34.2
P10809_1050
26.4
P10809_1069
34.8
P10809_1087
26.8
P10809_1110
27.7
T-reg nTPM: 69.0
Samples: 6
Max nTPM: 100.3
Min nTPM: 31.0
P10809_1018
64.2
P10809_1037
100.3
P10809_1056
31.0
P10809_1075
78.7
P10809_1094
81.5
P10809_1106
58.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
235.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 235.7
Samples: 4
Max nTPM: 248.3
Min nTPM: 218.4
RHH5202_R3573
218.4
RHH5230_R3602
230.6
RHH5259_R3631
245.4
RHH5288_R3660
248.3
Effector memory CD8 T-cell nTPM: 161.1
Samples: 4
Max nTPM: 247.2
Min nTPM: 99.1
RHH5203_R3574
185.3
RHH5231_R3603
112.8
RHH5260_R3632
99.1
RHH5289_R3661
247.2
MAIT T-cell nTPM: 149.9
Samples: 4
Max nTPM: 215.9
Min nTPM: 116.1
RHH5233_R3605
215.9
RHH5205_R3576
143.6
RHH5262_R3634
116.1
RHH5297_R3663
124.1
Memory CD4 T-cell TFH nTPM: 197.8
Samples: 4
Max nTPM: 259.9
Min nTPM: 145.1
RHH5300_R3666
145.1
RHH5236_R3608
154.1
RHH5265_R3637
232.0
RHH5208_R3579
259.9
Memory CD4 T-cell Th1 nTPM: 231.8
Samples: 4
Max nTPM: 327.6
Min nTPM: 155.4
RHH5210_R3581
211.2
RHH5302_R3668
155.4
RHH5238_R3610
327.6
RHH5267_R3639
233.1
Memory CD4 T-cell Th1/Th17 nTPM: 210.7
Samples: 4
Max nTPM: 380.4
Min nTPM: 122.0
RHH5303_R3669
141.9
RHH5211_R3582
122.0
RHH5239_R3611
380.4
RHH5268_R3640
198.3
Memory CD4 T-cell Th17 nTPM: 182.3
Samples: 4
Max nTPM: 240.2
Min nTPM: 141.2
RHH5304_R3670
149.4
RHH5212_R3583
141.2
RHH5240_R3612
198.4
RHH5269_R3641
240.2
Memory CD4 T-cell Th2 nTPM: 189.9
Samples: 4
Max nTPM: 241.2
Min nTPM: 134.5
RHH5305_R3671
134.5
RHH5213_R3584
170.5
RHH5241_R3613
241.2
RHH5270_R3642
213.3
Naive CD4 T-cell nTPM: 234.8
Samples: 4
Max nTPM: 349.1
Min nTPM: 149.4
RHH5306_R3672
154.5
RHH5214_R3585
149.4
RHH5242_R3614
349.1
RHH5271_R3643
286.2
Naive CD8 T-cell nTPM: 208.3
Samples: 4
Max nTPM: 232.8
Min nTPM: 180.5
RHH5201_R3572
180.5
RHH5229_R3601
187.0
RHH5258_R3630
232.7
RHH5287_R3659
232.8
Non-Vd2 gdTCR nTPM: 155.2
Samples: 4
Max nTPM: 217.2
Min nTPM: 81.8
RHH5235_R3607
217.2
RHH5264_R3636
81.8
RHH5207_R3578
179.7
RHH5299_R3665
142.0
T-reg nTPM: 235.8
Samples: 4
Max nTPM: 300.3
Min nTPM: 201.4
RHH5301_R3667
201.4
RHH5237_R3609
238.9
RHH5266_R3638
300.3
RHH5209_R3580
202.7
Terminal effector memory CD4 T-cell nTPM: 208.9
Samples: 2
Max nTPM: 214.1
Min nTPM: 203.6
RHH5243_R3615
214.1
RHH5272_R3644
203.6
Terminal effector memory CD8 T-cell nTPM: 166.2
Samples: 4
Max nTPM: 273.4
Min nTPM: 91.8
RHH5232_R3604
273.4
RHH5204_R3575
123.6
RHH5261_R3633
91.8
RHH5296_R3662
176.1
Vd2 gdTCR nTPM: 122.8
Samples: 4
Max nTPM: 200.0
Min nTPM: 64.4
RHH5234_R3606
200.0
RHH5206_R3577
64.4
RHH5263_R3635
123.4
RHH5298_R3664
103.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.