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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
146.5
nTPM
Monaco:
107.8
nTPM
Schmiedel:
39.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
146.5
HPA sample
nTPM
gdT-cell nTPM: 67.5
Samples: 6
Max nTPM: 74.7
Min nTPM: 50.8
P10809_1007
50.8
P10809_1022
72.4
P10809_1041
74.7
P10809_1060
70.0
P10809_1077
64.6
P10809_1098
72.2
MAIT T-cell nTPM: 83.2
Samples: 6
Max nTPM: 110.7
Min nTPM: 61.8
P10809_1006
61.8
P10809_1024
77.5
P10809_1043
92.2
P10809_1062
75.1
P10809_1083
82.0
P10809_1097
110.7
Memory CD4 T-cell nTPM: 95.1
Samples: 6
Max nTPM: 111.1
Min nTPM: 71.3
P10809_1014
71.3
P10809_1026
100.3
P10809_1045
111.1
P10809_1064
90.5
P10809_1086
92.6
P10809_1113
104.6
Memory CD8 T-cell nTPM: 88.1
Samples: 5
Max nTPM: 110.2
Min nTPM: 65.0
P10809_1012
65.0
P10809_1027
100.5
P10809_1046
90.9
P10809_1065
74.1
P10809_1111
110.2
Naive CD4 T-cell nTPM: 75.7
Samples: 6
Max nTPM: 99.8
Min nTPM: 62.2
P10809_1015
62.2
P10809_1030
75.1
P10809_1049
99.8
P10809_1068
63.6
P10809_1085
73.5
P10809_1112
80.2
Naive CD8 T-cell nTPM: 74.7
Samples: 6
Max nTPM: 100.8
Min nTPM: 52.4
P10809_1016
52.4
P10809_1031
100.8
P10809_1050
69.0
P10809_1069
80.2
P10809_1087
84.6
P10809_1110
61.2
T-reg nTPM: 146.6
Samples: 6
Max nTPM: 165.0
Min nTPM: 119.0
P10809_1018
119.0
P10809_1037
141.4
P10809_1056
165.0
P10809_1075
163.4
P10809_1094
129.6
P10809_1106
160.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
107.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 80.1
Samples: 4
Max nTPM: 135.8
Min nTPM: 45.1
RHH5202_R3573
93.5
RHH5230_R3602
45.1
RHH5259_R3631
45.9
RHH5288_R3660
135.8
Effector memory CD8 T-cell nTPM: 83.8
Samples: 4
Max nTPM: 103.8
Min nTPM: 65.0
RHH5203_R3574
97.3
RHH5231_R3603
103.8
RHH5260_R3632
69.0
RHH5289_R3661
65.0
MAIT T-cell nTPM: 83.5
Samples: 4
Max nTPM: 123.1
Min nTPM: 49.0
RHH5233_R3605
91.1
RHH5205_R3576
49.0
RHH5262_R3634
70.8
RHH5297_R3663
123.1
Memory CD4 T-cell TFH nTPM: 94.9
Samples: 4
Max nTPM: 130.1
Min nTPM: 75.5
RHH5300_R3666
84.8
RHH5236_R3608
130.1
RHH5265_R3637
75.5
RHH5208_R3579
89.1
Memory CD4 T-cell Th1 nTPM: 90.6
Samples: 4
Max nTPM: 161.7
Min nTPM: 54.5
RHH5210_R3581
74.9
RHH5302_R3668
161.7
RHH5238_R3610
54.5
RHH5267_R3639
71.3
Memory CD4 T-cell Th1/Th17 nTPM: 81.8
Samples: 4
Max nTPM: 129.7
Min nTPM: 41.1
RHH5303_R3669
129.7
RHH5211_R3582
90.5
RHH5239_R3611
41.1
RHH5268_R3640
66.0
Memory CD4 T-cell Th17 nTPM: 66.7
Samples: 4
Max nTPM: 112.2
Min nTPM: 42.8
RHH5304_R3670
64.9
RHH5212_R3583
112.2
RHH5240_R3612
46.8
RHH5269_R3641
42.8
Memory CD4 T-cell Th2 nTPM: 76.2
Samples: 4
Max nTPM: 94.5
Min nTPM: 48.2
RHH5305_R3671
94.5
RHH5213_R3584
69.7
RHH5241_R3613
92.2
RHH5270_R3642
48.2
Naive CD4 T-cell nTPM: 59.6
Samples: 4
Max nTPM: 106.2
Min nTPM: 25.1
RHH5306_R3672
60.7
RHH5214_R3585
106.2
RHH5242_R3614
46.4
RHH5271_R3643
25.1
Naive CD8 T-cell nTPM: 54.9
Samples: 4
Max nTPM: 80.7
Min nTPM: 23.1
RHH5201_R3572
80.7
RHH5229_R3601
23.1
RHH5258_R3630
64.6
RHH5287_R3659
51.0
Non-Vd2 gdTCR nTPM: 87.3
Samples: 4
Max nTPM: 117.6
Min nTPM: 57.3
RHH5235_R3607
57.3
RHH5264_R3636
117.6
RHH5207_R3578
62.7
RHH5299_R3665
111.4
T-reg nTPM: 95.0
Samples: 4
Max nTPM: 136.3
Min nTPM: 48.5
RHH5301_R3667
136.3
RHH5237_R3609
129.2
RHH5266_R3638
48.5
RHH5209_R3580
65.8
Terminal effector memory CD4 T-cell nTPM: 83.5
Samples: 2
Max nTPM: 107.3
Min nTPM: 59.6
RHH5243_R3615
59.6
RHH5272_R3644
107.3
Terminal effector memory CD8 T-cell nTPM: 107.8
Samples: 4
Max nTPM: 140.8
Min nTPM: 69.2
RHH5232_R3604
80.6
RHH5204_R3575
140.8
RHH5261_R3633
69.2
RHH5296_R3662
140.6
Vd2 gdTCR nTPM: 104.1
Samples: 4
Max nTPM: 146.7
Min nTPM: 63.7
RHH5234_R3606
66.3
RHH5206_R3577
146.7
RHH5263_R3635
63.7
RHH5298_R3664
139.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
