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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
54.2
nTPM
Monaco:
189.4
nTPM
Schmiedel:
195.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
54.2
HPA sample
nTPM
gdT-cell nTPM: 28.8
Samples: 6
Max nTPM: 56.7
Min nTPM: 11.4
P10809_1007
56.7
P10809_1022
21.8
P10809_1041
24.2
P10809_1060
11.4
P10809_1077
31.1
P10809_1098
27.3
MAIT T-cell nTPM: 35.9
Samples: 6
Max nTPM: 62.7
Min nTPM: 15.8
P10809_1006
46.4
P10809_1024
19.2
P10809_1043
37.3
P10809_1062
15.8
P10809_1083
33.9
P10809_1097
62.7
Memory CD4 T-cell nTPM: 44.3
Samples: 6
Max nTPM: 76.8
Min nTPM: 12.9
P10809_1014
62.1
P10809_1026
47.6
P10809_1045
76.8
P10809_1064
49.1
P10809_1086
17.2
P10809_1113
12.9
Memory CD8 T-cell nTPM: 47.9
Samples: 5
Max nTPM: 74.6
Min nTPM: 27.1
P10809_1012
65.9
P10809_1027
27.1
P10809_1046
74.6
P10809_1065
36.2
P10809_1111
35.6
Naive CD4 T-cell nTPM: 54.2
Samples: 6
Max nTPM: 169.2
Min nTPM: 15.7
P10809_1015
49.8
P10809_1030
41.4
P10809_1049
169.2
P10809_1068
30.0
P10809_1085
15.7
P10809_1112
18.8
Naive CD8 T-cell nTPM: 33.9
Samples: 6
Max nTPM: 49.1
Min nTPM: 13.2
P10809_1016
27.1
P10809_1031
45.6
P10809_1050
32.9
P10809_1069
49.1
P10809_1087
13.2
P10809_1110
35.4
T-reg nTPM: 48.7
Samples: 6
Max nTPM: 163.1
Min nTPM: 12.4
P10809_1018
17.4
P10809_1037
40.3
P10809_1056
163.1
P10809_1075
30.2
P10809_1094
12.4
P10809_1106
28.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
189.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 150.6
Samples: 4
Max nTPM: 274.0
Min nTPM: 54.3
RHH5202_R3573
54.3
RHH5230_R3602
274.0
RHH5259_R3631
180.6
RHH5288_R3660
93.3
Effector memory CD8 T-cell nTPM: 189.4
Samples: 4
Max nTPM: 349.7
Min nTPM: 77.8
RHH5203_R3574
119.3
RHH5231_R3603
210.8
RHH5260_R3632
349.7
RHH5289_R3661
77.8
MAIT T-cell nTPM: 140.0
Samples: 4
Max nTPM: 264.5
Min nTPM: 97.2
RHH5233_R3605
99.1
RHH5205_R3576
97.2
RHH5262_R3634
264.5
RHH5297_R3663
99.1
Memory CD4 T-cell TFH nTPM: 134.4
Samples: 4
Max nTPM: 256.7
Min nTPM: 82.0
RHH5300_R3666
115.8
RHH5236_R3608
256.7
RHH5265_R3637
83.1
RHH5208_R3579
82.0
Memory CD4 T-cell Th1 nTPM: 142.0
Samples: 4
Max nTPM: 250.5
Min nTPM: 75.2
RHH5210_R3581
78.6
RHH5302_R3668
75.2
RHH5238_R3610
163.5
RHH5267_R3639
250.5
Memory CD4 T-cell Th1/Th17 nTPM: 154.2
Samples: 4
Max nTPM: 277.2
Min nTPM: 70.7
RHH5303_R3669
70.7
RHH5211_R3582
156.9
RHH5239_R3611
111.8
RHH5268_R3640
277.2
Memory CD4 T-cell Th17 nTPM: 141.9
Samples: 4
Max nTPM: 246.4
Min nTPM: 65.7
RHH5304_R3670
76.2
RHH5212_R3583
179.2
RHH5240_R3612
65.7
RHH5269_R3641
246.4
Memory CD4 T-cell Th2 nTPM: 124.6
Samples: 4
Max nTPM: 197.2
Min nTPM: 74.8
RHH5305_R3671
99.3
RHH5213_R3584
127.1
RHH5241_R3613
74.8
RHH5270_R3642
197.2
Naive CD4 T-cell nTPM: 123.6
Samples: 4
Max nTPM: 175.1
Min nTPM: 81.5
RHH5306_R3672
130.0
RHH5214_R3585
175.1
RHH5242_R3614
81.5
RHH5271_R3643
107.9
Naive CD8 T-cell nTPM: 116.5
Samples: 4
Max nTPM: 234.1
Min nTPM: 36.4
RHH5201_R3572
36.4
RHH5229_R3601
234.1
RHH5258_R3630
92.3
RHH5287_R3659
103.1
Non-Vd2 gdTCR nTPM: 119.5
Samples: 4
Max nTPM: 194.1
Min nTPM: 70.8
RHH5235_R3607
194.1
RHH5264_R3636
85.9
RHH5207_R3578
70.8
RHH5299_R3665
127.3
T-reg nTPM: 147.3
Samples: 4
Max nTPM: 216.4
Min nTPM: 103.9
RHH5301_R3667
107.4
RHH5237_R3609
216.4
RHH5266_R3638
161.4
RHH5209_R3580
103.9
Terminal effector memory CD4 T-cell nTPM: 124.7
Samples: 2
Max nTPM: 176.2
Min nTPM: 73.2
RHH5243_R3615
176.2
RHH5272_R3644
73.2
Terminal effector memory CD8 T-cell nTPM: 138.6
Samples: 4
Max nTPM: 293.4
Min nTPM: 86.2
RHH5232_R3604
88.6
RHH5204_R3575
86.3
RHH5261_R3633
293.4
RHH5296_R3662
86.2
Vd2 gdTCR nTPM: 152.9
Samples: 4
Max nTPM: 183.3
Min nTPM: 109.3
RHH5234_R3606
181.6
RHH5206_R3577
109.3
RHH5263_R3635
183.3
RHH5298_R3664
137.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
