HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:13.4 nTPM
HPA Brain:44.3 nTPM
GTEx:13.4 nTPM
FANTOM5:43.5 Scaled Tags Per Million
Pig:24.9 nTPM
Mouse:30.5 nTPM
Allen mouse:1.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 44.3
Sample id Sample description nTPM
Hippocampus
nTPM: 39.0
1898 Male, age 80, left hemisphere 46.6
2148 Female, age 91, left hemisphere 41.2
1855 Male, age 76, left hemisphere 39.9
2529 Female, age 94, left hemisphere 37.8
2621 Female, age 67, right hemisphere 35.7
1911 Female, age 85, right hemisphere 32.9
Dentate gyrus
nTPM: 37.4
1927 Female, age 91, both hemispheres 43.3
2528 Male, age 74, both hemispheres 38.8
2010 Male, age 76, both hemispheres 37.2
2531 Female, age 67, both hemispheres 35.4
2246 Female, age 85, both hemispheres 34.9
2530 Female, age 94, left hemisphere 34.9
Entorhinal gyrus
nTPM: 37.6
2764 Male, age 80, right hemisphere 42.1
1938 Female, age 85, left hemisphere 41.2
2117 Female, age 91, right hemisphere 37.9
1787 Male, age 76, left hemisphere 36.2
2613 Female, age 94, left hemisphere 34.5
2686 Male, age 75, right hemisphere 33.5
Hippocampus, CA1
nTPM: 41.1
2749 Male, age 80, left hemisphere 53.3
2045 Male, age 76, both hemispheres 40.9
1873 Female, age 85, both hemispheres 38.7
2527 Male, age 74, both hemispheres 36.4
2082 Female, age 91, right hemisphere 36.1
Hippocampus, CA2
nTPM: 38.1
1963 Male, age 80, left hemisphere 43.3
1892 Male, age 76, both hemispheres 42.1
2113 Female, age 91, right hemisphere 37.1
2249 Male, age 74, both hemispheres 36.7
1940 Female, age 85, left hemisphere 36.1
2437 Female, age 94, left hemisphere 33.3
Hippocampus, CA3
nTPM: 38.5
2137 Male, age 80, left hemisphere 46.7
2620 Female, age 94, left hemisphere 39.9
1867 Male, age 76, both hemispheres 38.8
2436 Male, age 74, both hemispheres 35.7
1891 Female, age 85, both hemispheres 35.0
2861 Female, age 67, both hemispheres 34.7
Parahippocampal cortex
nTPM: 37.0
1850 Male, age 80, both hemispheres 45.7
1990 Female, age 91, right hemisphere 40.5
2245 Female, age 91, both hemispheres 39.5
1933 Female, age 85, both hemispheres 39.0
2018 Male, age 76, both hemispheres 35.7
2532 Female, age 72, left hemisphere 35.0
2693 Female, age 94, both hemispheres 34.8
2692 Male, age 74, both hemispheres 34.1
2250 Female, age 67, right hemisphere 33.3
2622 Female, age 67, right hemisphere 32.7
Perirhinal gyrus
nTPM: 44.3
1847 Female, age 91, left hemisphere 51.9
1794 Male, age 80, right hemisphere 50.2
1841 Female, age 85, right hemisphere 40.3
2521 Female, age 94, right hemisphere 39.8
2848 Male, age 76, right hemisphere 39.4
Subiculum
nTPM: 36.9
1901 Male, age 80, both hemispheres 38.5
2729 Female, age 91, right hemisphere 37.8
2438 Female, age 94, left hemisphere 37.1
1977 Female, age 85, both hemispheres 36.8
2619 Male, age 74, both hemispheres 36.1
2042 Male, age 76, both hemispheres 35.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.4
Samples: 197

Max nTPM: 30.3
Min nTPM: 6.0
Std nTPM: 4.1
Median nTPM: 13.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 30.3
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 24.4
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 23.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 23.4
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 23.0
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 22.7
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 22.5
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 22.4
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 22.2
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 21.7
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 20.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 43.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 43.5
FF:10169-103B7 60 years, female 48.8
FF:10153-102I9 76 years, female 38.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 24.9
Pig sample Sample description nTPM
Subiculum
nTPM: 23.7
Samples: 4

Max nTPM: 26.5
Min nTPM: 21.8
Sample A Female 26.5
Sample B Female 22.9
Sample C Male 23.6
Sample D Male 21.8
Dorsal hippocampus
nTPM: 24.6
Samples: 4

Max nTPM: 26.6
Min nTPM: 22.7
Sample A Female 25.1
Sample B Female 26.6
Sample C Male 22.7
Sample D Male 24.1
Entorhinal cortex
nTPM: 24.5
Samples: 4

Max nTPM: 26.4
Min nTPM: 22.8
Sample A Female 26.4
Sample B Female 22.8
Sample C Male 25.6
Sample D Male 23.1
Ventral hippocampus
nTPM: 25.0
Samples: 4

Max nTPM: 27.8
Min nTPM: 21.5
Sample A Female 24.4
Sample B Female 21.5
Sample C Male 27.8
Sample D Male 26.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 30.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 30.5
Samples: 4

Max nTPM: 31.2
Min nTPM: 29.9
Sample A Male 31.2
Sample B Male 29.9
Sample C Female 30.5
Sample D Female 30.5
Hippocampal formation
nTPM: 30.5
Samples: 4

Max nTPM: 31.7
Min nTPM: 27.4
Sample A Male 27.4
Sample B Male 31.7
Sample C Female 31.7
Sample D Female 31.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.9
67936390 Antisense, RP_040407_02_A04, Mouse strain C57BL/6J (56 days, male) 1.9
74047842 Antisense, RP_051214_02_A10, Mouse strain C57BL/6J (56 days, male) 1.8

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