HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:9.5 nTPM
HPA Brain:24.8 nTPM
GTEx:9.5 nTPM
FANTOM5:23.5 Scaled Tags Per Million
Pig:6.3 nTPM
Mouse:5.8 nTPM
Allen mouse:1.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001861
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 24.8
Sample id Sample description nTPM
Hippocampus
nTPM: 22.1
1855 Male, age 76, left hemisphere 27.5
2529 Female, age 94, left hemisphere 23.2
2621 Female, age 67, right hemisphere 23.0
1898 Male, age 80, left hemisphere 20.3
2148 Female, age 91, left hemisphere 20.2
1911 Female, age 85, right hemisphere 18.6
Dentate gyrus
nTPM: 21.6
2010 Male, age 76, both hemispheres 24.9
2246 Female, age 85, both hemispheres 24.5
2530 Female, age 94, left hemisphere 21.8
2528 Male, age 74, both hemispheres 20.0
1927 Female, age 91, both hemispheres 19.8
2531 Female, age 67, both hemispheres 18.9
Entorhinal gyrus
nTPM: 23.6
1787 Male, age 76, left hemisphere 25.9
2686 Male, age 75, right hemisphere 25.9
1938 Female, age 85, left hemisphere 25.2
2613 Female, age 94, left hemisphere 22.8
2764 Male, age 80, right hemisphere 21.5
2117 Female, age 91, right hemisphere 20.5
Hippocampus, CA1
nTPM: 21.0
2082 Female, age 91, right hemisphere 23.9
2045 Male, age 76, both hemispheres 21.3
2749 Male, age 80, left hemisphere 20.9
2527 Male, age 74, both hemispheres 20.6
1873 Female, age 85, both hemispheres 18.3
Hippocampus, CA2
nTPM: 22.5
2113 Female, age 91, right hemisphere 25.0
1892 Male, age 76, both hemispheres 24.9
1940 Female, age 85, left hemisphere 24.2
2437 Female, age 94, left hemisphere 22.2
2249 Male, age 74, both hemispheres 20.2
1963 Male, age 80, left hemisphere 18.4
Hippocampus, CA3
nTPM: 19.6
1867 Male, age 76, both hemispheres 24.7
2861 Female, age 67, both hemispheres 24.6
2137 Male, age 80, left hemisphere 19.7
2436 Male, age 74, both hemispheres 18.4
2620 Female, age 94, left hemisphere 16.8
1891 Female, age 85, both hemispheres 13.4
Parahippocampal cortex
nTPM: 24.8
2622 Female, age 67, right hemisphere 30.3
2018 Male, age 76, both hemispheres 28.1
2693 Female, age 94, both hemispheres 27.5
2532 Female, age 72, left hemisphere 26.7
2245 Female, age 91, both hemispheres 24.8
1933 Female, age 85, both hemispheres 22.9
1850 Male, age 80, both hemispheres 22.6
2692 Male, age 74, both hemispheres 22.6
2250 Female, age 67, right hemisphere 21.7
1990 Female, age 91, right hemisphere 21.1
Perirhinal gyrus
nTPM: 23.3
2848 Male, age 76, right hemisphere 30.1
1841 Female, age 85, right hemisphere 23.2
1794 Male, age 80, right hemisphere 21.9
1847 Female, age 91, left hemisphere 21.7
2521 Female, age 94, right hemisphere 19.8
Subiculum
nTPM: 22.3
2042 Male, age 76, both hemispheres 25.9
2729 Female, age 91, right hemisphere 25.6
2619 Male, age 74, both hemispheres 22.5
2438 Female, age 94, left hemisphere 22.3
1901 Male, age 80, both hemispheres 18.9
1977 Female, age 85, both hemispheres 18.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 9.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.5
Samples: 197

Max nTPM: 27.3
Min nTPM: 2.2
Std nTPM: 3.5
Median nTPM: 8.9
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 27.3
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 26.7
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 22.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 21.1
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 17.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 17.0
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 15.8
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 15.7
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 15.2
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 15.1
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 15.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 23.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 23.5
FF:10153-102I9 76 years, female 28.3
FF:10169-103B7 60 years, female 18.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 6.3
Pig sample Sample description nTPM
Subiculum
nTPM: 6.3
Samples: 4

Max nTPM: 7.2
Min nTPM: 5.3
Sample A Female 6.5
Sample B Female 5.3
Sample C Male 6.1
Sample D Male 7.2
Dorsal hippocampus
nTPM: 5.5
Samples: 4

Max nTPM: 6.4
Min nTPM: 4.5
Sample A Female 6.3
Sample B Female 4.7
Sample C Male 6.4
Sample D Male 4.5
Entorhinal cortex
nTPM: 5.4
Samples: 4

Max nTPM: 6.9
Min nTPM: 4.2
Sample A Female 6.9
Sample B Female 4.6
Sample C Male 5.8
Sample D Male 4.2
Ventral hippocampus
nTPM: 6.3
Samples: 4

Max nTPM: 8.0
Min nTPM: 5.3
Sample A Female 5.8
Sample B Female 5.3
Sample C Male 8.0
Sample D Male 6.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 5.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.8
Samples: 4

Max nTPM: 6.5
Min nTPM: 5.4
Sample A Male 6.5
Sample B Male 5.4
Sample C Female 5.6
Sample D Female 5.8
Hippocampal formation
nTPM: 3.9
Samples: 4

Max nTPM: 4.9
Min nTPM: 3.3
Sample A Male 3.5
Sample B Male 3.3
Sample C Female 4.0
Sample D Female 4.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.8
69290549 Antisense, RP_050407_04_C04, Mouse strain C57BL/6J (56 days, male) 1.8

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