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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
114.1
nTPM
Monaco:
259.4
nTPM
Schmiedel:
327.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
114.1
HPA sample
nTPM
gdT-cell nTPM: 71.4
Samples: 6
Max nTPM: 98.7
Min nTPM: 60.1
P10809_1007
60.1
P10809_1022
64.2
P10809_1041
69.4
P10809_1060
63.5
P10809_1077
72.4
P10809_1098
98.7
MAIT T-cell nTPM: 74.1
Samples: 6
Max nTPM: 89.1
Min nTPM: 57.8
P10809_1006
57.8
P10809_1024
86.2
P10809_1043
66.3
P10809_1062
69.9
P10809_1083
75.1
P10809_1097
89.1
Memory CD4 T-cell nTPM: 89.5
Samples: 6
Max nTPM: 115.7
Min nTPM: 68.2
P10809_1014
68.2
P10809_1026
82.0
P10809_1045
95.8
P10809_1064
83.8
P10809_1086
91.7
P10809_1113
115.7
Memory CD8 T-cell nTPM: 87.6
Samples: 5
Max nTPM: 132.4
Min nTPM: 63.9
P10809_1012
63.9
P10809_1027
92.6
P10809_1046
73.0
P10809_1065
76.1
P10809_1111
132.4
Naive CD4 T-cell nTPM: 70.8
Samples: 6
Max nTPM: 82.7
Min nTPM: 55.8
P10809_1015
55.8
P10809_1030
82.7
P10809_1049
68.6
P10809_1068
61.3
P10809_1085
79.7
P10809_1112
76.6
Naive CD8 T-cell nTPM: 86.4
Samples: 6
Max nTPM: 114.8
Min nTPM: 53.2
P10809_1016
53.2
P10809_1031
114.8
P10809_1050
91.5
P10809_1069
73.8
P10809_1087
104.4
P10809_1110
80.7
T-reg nTPM: 114.1
Samples: 6
Max nTPM: 174.3
Min nTPM: 85.8
P10809_1018
94.3
P10809_1037
114.9
P10809_1056
128.6
P10809_1075
85.8
P10809_1094
86.5
P10809_1106
174.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
259.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 223.5
Samples: 4
Max nTPM: 238.9
Min nTPM: 208.9
RHH5202_R3573
221.4
RHH5230_R3602
238.9
RHH5259_R3631
208.9
RHH5288_R3660
224.7
Effector memory CD8 T-cell nTPM: 229.6
Samples: 4
Max nTPM: 263.7
Min nTPM: 189.6
RHH5203_R3574
255.4
RHH5231_R3603
209.8
RHH5260_R3632
189.6
RHH5289_R3661
263.7
MAIT T-cell nTPM: 220.3
Samples: 4
Max nTPM: 276.9
Min nTPM: 168.1
RHH5233_R3605
215.7
RHH5205_R3576
276.9
RHH5262_R3634
220.6
RHH5297_R3663
168.1
Memory CD4 T-cell TFH nTPM: 213.9
Samples: 4
Max nTPM: 288.1
Min nTPM: 179.3
RHH5300_R3666
182.8
RHH5236_R3608
179.3
RHH5265_R3637
205.2
RHH5208_R3579
288.1
Memory CD4 T-cell Th1 nTPM: 218.7
Samples: 4
Max nTPM: 236.7
Min nTPM: 201.9
RHH5210_R3581
206.9
RHH5302_R3668
236.7
RHH5238_R3610
201.9
RHH5267_R3639
229.1
Memory CD4 T-cell Th1/Th17 nTPM: 203.6
Samples: 4
Max nTPM: 225.8
Min nTPM: 181.3
RHH5303_R3669
181.3
RHH5211_R3582
194.8
RHH5239_R3611
225.8
RHH5268_R3640
212.3
Memory CD4 T-cell Th17 nTPM: 209.7
Samples: 4
Max nTPM: 236.8
Min nTPM: 172.6
RHH5304_R3670
172.6
RHH5212_R3583
218.6
RHH5240_R3612
236.8
RHH5269_R3641
210.8
Memory CD4 T-cell Th2 nTPM: 217.8
Samples: 4
Max nTPM: 258.3
Min nTPM: 167.3
RHH5305_R3671
167.3
RHH5213_R3584
221.7
RHH5241_R3613
258.3
RHH5270_R3642
223.8
Naive CD4 T-cell nTPM: 183.1
Samples: 4
Max nTPM: 216.7
Min nTPM: 155.9
RHH5306_R3672
162.5
RHH5214_R3585
155.9
RHH5242_R3614
197.1
RHH5271_R3643
216.7
Naive CD8 T-cell nTPM: 177.4
Samples: 4
Max nTPM: 219.8
Min nTPM: 143.4
RHH5201_R3572
219.8
RHH5229_R3601
160.0
RHH5258_R3630
186.5
RHH5287_R3659
143.4
Non-Vd2 gdTCR nTPM: 238.5
Samples: 4
Max nTPM: 281.9
Min nTPM: 186.8
RHH5235_R3607
273.5
RHH5264_R3636
186.8
RHH5207_R3578
281.9
RHH5299_R3665
211.7
T-reg nTPM: 188.7
Samples: 4
Max nTPM: 219.6
Min nTPM: 168.1
RHH5301_R3667
189.5
RHH5237_R3609
177.7
RHH5266_R3638
219.6
RHH5209_R3580
168.1
Terminal effector memory CD4 T-cell nTPM: 259.4
Samples: 2
Max nTPM: 282.2
Min nTPM: 236.6
RHH5243_R3615
282.2
RHH5272_R3644
236.6
Terminal effector memory CD8 T-cell nTPM: 236.7
Samples: 4
Max nTPM: 253.2
Min nTPM: 223.5
RHH5232_R3604
223.5
RHH5204_R3575
253.2
RHH5261_R3633
238.5
RHH5296_R3662
231.7
Vd2 gdTCR nTPM: 222.5
Samples: 4
Max nTPM: 247.7
Min nTPM: 201.5
RHH5234_R3606
247.7
RHH5206_R3577
237.4
RHH5263_R3635
203.5
RHH5298_R3664
201.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
