HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:146.2 nTPM
HPA Brain:78.8 nTPM
GTEx:146.2 nTPM
FANTOM5:141.6 Scaled Tags Per Million
Pig:132.3 nTPM
Mouse:316.3 nTPM
Allen mouse:23.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA013136Antibody HPA074618
Glial cells Not detectedNot detected
Neuronal cells LowLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 78.8
Sample id Sample description nTPM
Hippocampus
nTPM: 53.7
1898 Male, age 80, left hemisphere 80.1
2621 Female, age 67, right hemisphere 60.8
1855 Male, age 76, left hemisphere 58.4
1911 Female, age 85, right hemisphere 49.1
2148 Female, age 91, left hemisphere 44.5
2529 Female, age 94, left hemisphere 29.2
Dentate gyrus
nTPM: 65.5
1927 Female, age 91, both hemispheres 93.8
2530 Female, age 94, left hemisphere 70.1
2010 Male, age 76, both hemispheres 69.6
2528 Male, age 74, both hemispheres 69.0
2246 Female, age 85, both hemispheres 45.5
2531 Female, age 67, both hemispheres 45.1
Entorhinal gyrus
nTPM: 50.8
1938 Female, age 85, left hemisphere 66.7
2764 Male, age 80, right hemisphere 64.9
1787 Male, age 76, left hemisphere 58.8
2613 Female, age 94, left hemisphere 53.4
2686 Male, age 75, right hemisphere 30.6
2117 Female, age 91, right hemisphere 30.3
Hippocampus, CA1
nTPM: 75.1
2749 Male, age 80, left hemisphere 108.8
2527 Male, age 74, both hemispheres 71.6
2082 Female, age 91, right hemisphere 69.4
1873 Female, age 85, both hemispheres 68.1
2045 Male, age 76, both hemispheres 57.5
Hippocampus, CA2
nTPM: 69.7
2249 Male, age 74, both hemispheres 104.5
1892 Male, age 76, both hemispheres 104.1
1963 Male, age 80, left hemisphere 71.5
2437 Female, age 94, left hemisphere 55.6
1940 Female, age 85, left hemisphere 41.9
2113 Female, age 91, right hemisphere 40.9
Hippocampus, CA3
nTPM: 76.8
2436 Male, age 74, both hemispheres 140.8
2137 Male, age 80, left hemisphere 90.9
1867 Male, age 76, both hemispheres 71.6
2620 Female, age 94, left hemisphere 70.0
1891 Female, age 85, both hemispheres 47.7
2861 Female, age 67, both hemispheres 39.6
Parahippocampal cortex
nTPM: 59.5
1850 Male, age 80, both hemispheres 82.8
1990 Female, age 91, right hemisphere 73.7
2532 Female, age 72, left hemisphere 70.6
1933 Female, age 85, both hemispheres 65.8
2245 Female, age 91, both hemispheres 64.1
2250 Female, age 67, right hemisphere 64.1
2018 Male, age 76, both hemispheres 62.0
2693 Female, age 94, both hemispheres 57.8
2622 Female, age 67, right hemisphere 42.6
2692 Male, age 74, both hemispheres 11.6
Perirhinal gyrus
nTPM: 78.8
1847 Female, age 91, left hemisphere 93.3
1841 Female, age 85, right hemisphere 83.4
2521 Female, age 94, right hemisphere 78.7
1794 Male, age 80, right hemisphere 74.9
2848 Male, age 76, right hemisphere 63.6
Subiculum
nTPM: 40.0
1901 Male, age 80, both hemispheres 64.9
1977 Female, age 85, both hemispheres 59.7
2619 Male, age 74, both hemispheres 40.0
2729 Female, age 91, right hemisphere 35.1
2042 Male, age 76, both hemispheres 30.2
2438 Female, age 94, left hemisphere 10.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 146.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 146.2
Samples: 197

Max nTPM: 414.5
Min nTPM: 18.2
Std nTPM: 86.4
Median nTPM: 126.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 414.5
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 384.0
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 369.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 365.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 353.8
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 349.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 327.4
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 322.3
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 321.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 314.5
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 313.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 141.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 141.6
FF:10169-103B7 60 years, female 227.4
FF:10153-102I9 76 years, female 55.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 132.3
Pig sample Sample description nTPM
Subiculum
nTPM: 105.2
Samples: 4

Max nTPM: 121.8
Min nTPM: 98.3
Sample A Female 121.8
Sample B Female 98.3
Sample C Male 100.6
Sample D Male 100.1
Dorsal hippocampus
nTPM: 132.3
Samples: 4

Max nTPM: 170.7
Min nTPM: 88.4
Sample A Female 170.7
Sample B Female 158.7
Sample C Male 88.4
Sample D Male 111.4
Entorhinal cortex
nTPM: 116.5
Samples: 4

Max nTPM: 140.7
Min nTPM: 90.6
Sample A Female 119.2
Sample B Female 140.7
Sample C Male 115.3
Sample D Male 90.6
Ventral hippocampus
nTPM: 131.3
Samples: 4

Max nTPM: 181.7
Min nTPM: 93.1
Sample A Female 181.7
Sample B Female 93.1
Sample C Male 137.1
Sample D Male 113.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 316.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 316.3
Samples: 4

Max nTPM: 385.0
Min nTPM: 256.8
Sample A Male 323.4
Sample B Male 385.0
Sample C Female 300.1
Sample D Female 256.8
Hippocampal formation
nTPM: 293.2
Samples: 4

Max nTPM: 331.4
Min nTPM: 276.9
Sample A Male 331.4
Sample B Male 276.9
Sample C Female 282.0
Sample D Female 282.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 23.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 23.5
71608208 Antisense, RP_050927_01_B04, Mouse strain C57BL/6J (56 days, male) 24.5
75773511 Antisense, RP_060530_01_A01, Mouse strain C57BL/6J (56 days, male) 22.5

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